RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 USP10Q14694 798 aaKnown RBP16.39■□□□□ 0.21
TPM1-219ENST00000559397 DBN1Q16643 649 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 TYSND1Q2T9J0 566 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 WSCD2Q2TBF2 565 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 SETMARQ53H47 684 aaPredicted RBP16.39■□□□□ 0.21
TPM1-219ENST00000559397 ZNF789Q5FWF6 425 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 HENMT1Q5T8I9 393 aaKnown RBP16.39■□□□□ 0.21
TPM1-219ENST00000559397 ZDHHC20Q5W0Z9 365 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 AFTPHQ6ULP2 937 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 LCA5Q86VQ0 697 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 PELI3Q8N2H9 469 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 ARMC2Q8NEN0 867 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 DTX3LQ8TDB6 740 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 LRRC8CQ8TDW0 803 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 AP2M1Q96CW1 435 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 NSRP1Q9H0G5 558 aaKnown RBP16.39■□□□□ 0.21
TPM1-219ENST00000559397 CDH19Q9H159 772 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 RAD18Q9NS91 495 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 CATSPERZQ9NTU4 200 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 KCTD5Q9NXV2 234 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 ANKRD6Q9Y2G4 727 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 PCDHGA2Q9Y5H1 932 aa16.39■□□□□ 0.21
TPM1-219ENST00000559397 THADAQ6YHU6 1953 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 FANCMQ8IYD8 2048 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 BIRC5O15392 142 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 SLC31A1O15431 190 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 CRABP2P29373 138 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 SEMA3AQ14563 771 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 N4BP2L1Q5TBK1 243 aaPredicted RBP16.38■□□□□ 0.21
TPM1-219ENST00000559397 TMEFF1Q8IYR6 380 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 PLD6Q8N2A8 252 aaKnown RBP16.38■□□□□ 0.21
TPM1-219ENST00000559397 RIOK2Q9BVS4 552 aaKnown RBP16.38■□□□□ 0.21
TPM1-219ENST00000559397 FZD3Q9NPG1 666 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 MBNL1Q9NR56 388 aaKnown RBP16.38■□□□□ 0.21
TPM1-219ENST00000559397 FGFR1OP2Q9NVK5 253 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 SIRPGQ9P1W8 387 aa16.38■□□□□ 0.21
TPM1-219ENST00000559397 CORO1CQ9ULV4 474 aaPredicted RBP16.38■□□□□ 0.21
TPM1-219ENST00000559397 GLYATL1P3A0A0U1RQE8 302 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 A0A1W2PPC4 97 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 WDR91A4D1P6 747 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 ERICH4A6NGS2 130 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 DLL1O00548 723 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 KLF11O14901 512 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 SOD1P00441 154 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 PROCP04070 461 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 BPGMP07738 259 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 SLC35E2BP0CK96 405 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 COL6A2P12110 1019 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 HNRNPA2B1P22626 353 aaKnown RBP16.37■□□□□ 0.21
TPM1-219ENST00000559397 NUDT1P36639 197 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 TAS2R39P59534 338 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 RAB10P61026 200 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 IRF4Q15306 451 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 PLK5Q496M5 336 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 PMS2CLQ68D20 193 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 C16orf46Q6P387 395 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 FOXR1Q6PIV2 292 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 FAM151BQ6UXP7 276 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 LDB1Q86U70 411 aaPredicted RBP16.37■□□□□ 0.21
TPM1-219ENST00000559397 OTUD6BQ8N6M0 293 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 PLA2G15Q8NCC3 412 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 DENND6BQ8NEG7 585 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 FOXJ1Q92949 421 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 TCF12Q99081 682 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 C1QTNF7Q9BXJ2 289 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 MANSC1Q9H8J5 431 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 TMEM216Q9P0N5 145 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 APPL1Q9UKG1 709 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 DMTF1Q9Y222 760 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 K7ESM1 405 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 SRP72O76094 671 aaKnown RBP16.37■□□□□ 0.21
TPM1-219ENST00000559397 STMN1P16949 149 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 MC4RP32245 332 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 CA5AP35218 305 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 GMPRP36959 345 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 CHRNA6Q15825 494 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 RBM20Q5T481 1227 aaKnown RBP16.37■□□□□ 0.21
TPM1-219ENST00000559397 GKAP1Q5VSY0 366 aaPredicted RBP16.37■□□□□ 0.21
TPM1-219ENST00000559397 LPCAT2Q7L5N7 544 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 SDCCAG8Q86SQ7 713 aaPredicted RBP16.37■□□□□ 0.21
TPM1-219ENST00000559397 CEP97Q8IW35 865 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 TRAM1L1Q8N609 369 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 PNPLA1Q8N8W4 532 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 DNASE2BQ8WZ79 361 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 SEC16BQ96JE7 1060 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 ELMO2Q96JJ3 720 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 ZC3H10Q96K80 434 aaKnown RBP16.37■□□□□ 0.21
TPM1-219ENST00000559397 HSPA12BQ96MM6 686 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 INTS10Q9NVR2 710 aaKnown RBP16.37■□□□□ 0.21
TPM1-219ENST00000559397 TLK1Q9UKI8 766 aa16.37■□□□□ 0.21
TPM1-219ENST00000559397 FNDC3AQ9Y2H6 1198 aaKnown RBP16.37■□□□□ 0.21
TPM1-219ENST00000559397 TNRC6BQ9UPQ9 1833 aaKnown RBP16.36■□□□□ 0.21
TPM1-219ENST00000559397 VPS13AQ96RL7 3174 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 AGAP14A8MT82 685 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 FADS2P1A8MWK0 482 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 PHGDHO43175 533 aaKnown RBP16.36■□□□□ 0.21
TPM1-219ENST00000559397 GPR39O43194 453 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 SNX3O60493 162 aa16.36■□□□□ 0.21
TPM1-219ENST00000559397 EDF1O60869 148 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms