RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 H3BMM5 538 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 RFPL1O75677 317 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 MT-ND3P03897 115 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 HOXC4P09017 264 aaPredicted RBP17.86■□□□□ 0.45
CLPX-203ENST00000558958 MYCLP1P12525 358 aaPredicted RBP17.86■□□□□ 0.45
CLPX-203ENST00000558958 MAGEA12P43365 314 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 SERPINB8P50452 374 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 CDKN2DP55273 166 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 TAS2R39P59534 338 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 TIAL1Q01085 375 aaKnown RBP eCLIP17.86■□□□□ 0.45
CLPX-203ENST00000558958 GCNT7Q6ZNI0 430 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 ADGRG6Q86SQ4 1221 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 DEFB119Q8N690 84 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 TLCD1Q96CP7 247 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 SERAC1Q96JX3 654 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 ATP6V1G3Q96LB4 118 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 OLFM1Q99784 485 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 FAM126AQ9BYI3 521 aaPredicted RBP17.86■□□□□ 0.45
CLPX-203ENST00000558958 ZCCHC2Q9C0B9 1178 aaKnown RBP17.86■□□□□ 0.45
CLPX-203ENST00000558958 OR2AG1Q9H205 316 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 MED4Q9NPJ6 270 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 SNX15Q9NRS6 342 aa17.86■□□□□ 0.45
CLPX-203ENST00000558958 NOVA2Q9UNW9 492 aaKnown RBP17.86■□□□□ 0.45
CLPX-203ENST00000558958 H0Y8X5 98 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 TPP1O14773 563 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 SGTAO43765 313 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 VEGFDO43915 354 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 AP2A2O94973 939 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 SAT1P21673 171 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 CD9P21926 228 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 FDXRP22570 491 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 CD27P26842 260 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 CSRP3P50461 194 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 PFN3P60673 137 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 GPS2Q13227 327 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 ZKSCAN8Q15776 578 aaPredicted RBP17.85■□□□□ 0.45
CLPX-203ENST00000558958 PTRHD1Q6GMV3 140 aaKnown RBP17.85■□□□□ 0.45
CLPX-203ENST00000558958 DET1Q7L5Y6 550 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 ABI3BPQ7Z7G0 1075 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 CMC1Q7Z7K0 106 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 CEP97Q8IW35 865 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 RASGEF1AQ8N9B8 481 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 SNX19Q92543 992 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 KCNJ9Q92806 393 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 NELL1Q92832 810 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 FOXJ1Q92949 421 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 SGF29Q96ES7 293 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 DUSP15Q9H1R2 295 aaPredicted RBP17.85■□□□□ 0.45
CLPX-203ENST00000558958 C11orf16Q9NQ32 467 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 ATXN10Q9UBB4 475 aa17.85■□□□□ 0.45
CLPX-203ENST00000558958 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 IQCF5A8MTL0 148 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 HMGB1P1B2RPK0 211 aaPredicted RBP17.84■□□□□ 0.45
CLPX-203ENST00000558958 GPR37L1O60883 481 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 NIPSNAP2O75323 286 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 RHOBTB1O94844 696 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 CDK14O94921 469 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 OR56A5P0C7T3 313 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 STMN1P16949 149 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 TYK2P29597 1187 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 CTSCP53634 463 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 SLC12A2P55011 1212 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 RAB10P61026 200 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 PDE1CQ14123 709 aaPredicted RBP17.84■□□□□ 0.45
CLPX-203ENST00000558958 HSP90B2PQ58FF3 399 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 KCTD16Q68DU8 428 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 KYAT3Q6YP21 454 aaKnown RBP17.84■□□□□ 0.45
CLPX-203ENST00000558958 SH2D5Q6ZV89 423 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 EXOC3L1Q86VI1 746 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 SRRM1Q8IYB3 904 aaKnown RBP17.84■□□□□ 0.45
CLPX-203ENST00000558958 TMEFF1Q8IYR6 380 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 GAB3Q8WWW8 586 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 TSPAN17Q96FV3 270 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 HSPA12BQ96MM6 686 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 TAS2R13Q9NYV9 303 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 SENP1Q9P0U3 644 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 TMEM98Q9Y2Y6 226 aa17.84■□□□□ 0.45
CLPX-203ENST00000558958 FAM86C2PA6NEL3 165 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 MEI4A8MW99 385 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 CACNB4O00305 520 aaPredicted RBP17.83■□□□□ 0.45
CLPX-203ENST00000558958 TOR1BO14657 336 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 ASMTLO95671 621 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 ZNF8P17098 575 aaPredicted RBP17.83■□□□□ 0.45
CLPX-203ENST00000558958 CRABP2P29373 138 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 PGGT1BP53609 377 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 KIAA1024LP59773 190 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 MAGOHP61326 146 aaKnown RBP17.83■□□□□ 0.45
CLPX-203ENST00000558958 YPEL5P62699 121 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 ZNF528Q3MIS6 628 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 PIM3Q86V86 326 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 C11orf74Q86VG3 221 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 KRT222Q8N1A0 295 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 ACMSDQ8TDX5 336 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 EIF2B4Q9UI10 523 aaKnown RBP17.83■□□□□ 0.45
CLPX-203ENST00000558958 ACTL7BQ9Y614 415 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 SLCO1B1Q9Y6L6 691 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 ABCA7Q8IZY2 2146 aa17.83■□□□□ 0.45
CLPX-203ENST00000558958 OR2AG2A6NM03 316 aa17.82■□□□□ 0.44
CLPX-203ENST00000558958 A6NNZ2 444 aa17.82■□□□□ 0.44
CLPX-203ENST00000558958 GPR89AB7ZAQ6 455 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms