RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SDK2Q58EX2 2172 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 UBXN7O94888 489 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 MT-CYBP00156 380 aaPredicted RBP13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 ANKRD34CP0C6C1 535 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 BPIP17213 487 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 ITGB6P18564 788 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 WT1P19544 449 aaPredicted RBP13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 HMGCLP35914 325 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 HALP42357 657 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 CSRP3P50461 194 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 UBE2IP63279 158 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 ABHD18Q0P651 414 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 IL11RAQ14626 422 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 TCEAL1Q15170 157 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 CRTC3Q6UUV7 619 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 ABRAXAS1Q6UWZ7 409 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 NPNTQ6UXI9 565 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 WASH2PQ6VEQ5 465 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 VSTM4Q8IW00 320 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 P3H4Q92791 437 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 PMEPA1Q969W9 287 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 CXorf40BQ96DE9 158 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 ZDHHC12Q96GR4 267 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 VPS35Q96QK1 796 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 VAT1Q99536 393 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 CTRCQ99895 268 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 FERMT1Q9BQL6 677 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 TBC1D10AQ9BXI6 508 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 ZCCHC2Q9C0B9 1178 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 WASH6PQ9NQA3 447 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 HACD3Q9P035 362 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 FAM153AQ9UHL3 310 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 TUBD1Q9UJT1 453 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 ADGRG1Q9Y653 693 aa13.41□□□□□ -0.26
SNRPA1-204ENST00000558020 SUV39H1O43463 412 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 CST8O60676 142 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 MFAP3LO75121 409 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 STK17BO94768 372 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 ZRANB2O95218 330 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 COMTP21964 271 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 SLC19A1P41440 591 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 FOXM1Q08050 763 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 TMEM115Q12893 351 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 PRKD1Q15139 912 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 TFDP3Q5H9I0 405 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 ZNF648Q5T619 568 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 AGAP9Q5VTM2 703 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 KLHL35Q6PF15 583 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 MFSD7Q6UXD7 560 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 RCOR2Q8IZ40 523 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 ESX1Q8N693 406 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 DTX3LQ8TDB6 740 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 HTR3CQ8WXA8 447 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 C9orf72Q96LT7 481 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 SPRY4Q9C004 299 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 LUC7LQ9NQ29 371 aaKnown RBP13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 POT1Q9NUX5 634 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 UBP1Q9NZI7 540 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 SLC23A2Q9UGH3 650 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 IL17BQ9UHF5 180 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 TRHDEQ9UKU6 1024 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 DNAJC16Q9Y2G8 782 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 TMEM184BQ9Y519 407 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 PCDHB3Q9Y5E6 796 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 SPTA1P02549 2419 aa13.4□□□□□ -0.26
SNRPA1-204ENST00000558020 MN1Q10571 1320 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 LOC285095A0A1B0GVY8 99 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 AKR1B15C9JRZ8 316 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 PSTPIP1O43586 416 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 RASSF9O75901 435 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 C9P02748 559 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 TYRP1P17643 537 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 PTPN3P26045 913 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 RPL10P27635 214 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 CDKN2BP42772 138 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 POLE2P56282 527 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 WNT3AP56704 352 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 KCNAB2Q13303 367 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 MAP7Q14244 749 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 CLCA4Q14CN2 919 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 SEPT7Q16181 437 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 LDLRAP1Q5SW96 308 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 KAZNQ674X7 775 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 PID1Q7Z2X4 250 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 AMZ2Q86W34 360 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 TRAPPC5Q8IUR0 188 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 TGM7Q96PF1 710 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 ULBP3Q9BZM4 244 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 TSPY26PQ9H489 355 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 BPIFA1Q9NP55 256 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 SLC40A1Q9NP59 571 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 KLHL8Q9P2G9 620 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 ZNF624Q9P2J8 865 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 SAE1Q9UBE0 346 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 PKP3Q9Y446 797 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 ALG6Q9Y672 507 aa13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 DNMT3AQ9Y6K1 912 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-204ENST00000558020 HACD1B0YJ81 288 aa13.38□□□□□ -0.27
SNRPA1-204ENST00000558020 MTX2O75431 263 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms