RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ZNF711Q9Y462 761 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 HEY1Q9Y5J3 304 aa15.7■□□□□ 0.1
SCFD1-224ENST00000557713 GOLGA6L3A6NEY3 463 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 VEGFDO43915 354 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 BPIP17213 487 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 AMD1P17707 334 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 CASP14P31944 242 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 SEPHS1P49903 392 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 TPM4P67936 248 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 SH3BP2P78314 561 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 AP1B1Q10567 949 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 UBAP2LQ14157 1087 aaKnown RBP15.69■□□□□ 0.1
SCFD1-224ENST00000557713 IL11RAQ14626 422 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 SLC14A2Q15849 920 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 SLC18A3Q16572 532 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 ASTE1Q2TB18 679 aaPredicted RBP15.69■□□□□ 0.1
SCFD1-224ENST00000557713 PLA2G4EQ3MJ16 856 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 KHDC1Q4VXA5 237 aaKnown RBP15.69■□□□□ 0.1
SCFD1-224ENST00000557713 ZFYVE27Q5T4F4 411 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 AGAP9Q5VTM2 703 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 WASH2PQ6VEQ5 465 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 C11orf96Q7Z7L8 435 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 VSIG1Q86XK7 387 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 TRIM48Q8IWZ4 208 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 KLHL6Q8WZ60 621 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 AGAP3Q96P47 875 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 OLFM3Q96PB7 478 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 TGM7Q96PF1 710 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 OR6C1Q96RD1 312 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 GPR63Q9BZJ6 419 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 ULBP3Q9BZM4 244 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 SLC40A1Q9NP59 571 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 WASH6PQ9NQA3 447 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 DNAJC16Q9Y2G8 782 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 KCTD3Q9Y597 815 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 KCNMB2Q9Y691 235 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 COL12A1Q99715 3063 aa15.69■□□□□ 0.1
SCFD1-224ENST00000557713 LRRD1A4D1F6 860 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 CLEC18AA5D8T8 446 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 PDZK1P1A8MUH7 402 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 AURKAO14965 403 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 KIF1CO43896 1103 aaKnown RBP15.68■□□□□ 0.1
SCFD1-224ENST00000557713 MTX2O75431 263 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 CDK14O94921 469 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 FGF5P12034 268 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 IDSP22304 550 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 RPL10P27635 214 aaKnown RBP15.68■□□□□ 0.1
SCFD1-224ENST00000557713 DLSTP36957 453 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
SCFD1-224ENST00000557713 MESDQ14696 234 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 PDK1Q15118 436 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 SEPT7Q16181 437 aaKnown RBP15.68■□□□□ 0.1
SCFD1-224ENST00000557713 PCSK7Q16549 785 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 CLEC18BQ6UXF7 455 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 NPNTQ6UXI9 565 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 RBM12BQ8IXT5 1001 aaKnown RBP15.68■□□□□ 0.1
SCFD1-224ENST00000557713 CLEC18CQ8NCF0 446 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 GALNT6Q8NCL4 622 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 SPATA22Q8NHS9 363 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 RNF31Q96EP0 1072 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 VPS35Q96QK1 796 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 RAB33BQ9H082 229 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 POT1Q9NUX5 634 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 EPHA6Q9UF33 1036 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 CROTQ9UKG9 612 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 SPO11Q9Y5K1 396 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 PTPN13Q12923 2485 aa15.68■□□□□ 0.1
SCFD1-224ENST00000557713 NAV2Q8IVL1 2488 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 RELNP78509 3460 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 OR52A4PA6NMU1 304 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 APOL1O14791 398 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 KIAA0754O94854 1291 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 NDST3O95803 873 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 MT-CYBP00156 380 aaPredicted RBP15.67■□□□□ 0.1
SCFD1-224ENST00000557713 FURINP09958 794 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 TMEM253P0C7T8 217 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 CAPZBP47756 277 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 DRG2P55039 364 aaKnown RBP15.67■□□□□ 0.1
SCFD1-224ENST00000557713 TMEM115Q12893 351 aaPredicted RBP15.67■□□□□ 0.1
SCFD1-224ENST00000557713 SEPT6Q14141 434 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 GPR18Q14330 331 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 LACTB2Q53H82 288 aaPredicted RBP15.67■□□□□ 0.1
SCFD1-224ENST00000557713 PRSS42Q7Z5A4 293 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 SLC35G2Q8TBE7 412 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 RSC1A1Q92681 617 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 SRPK1Q96SB4 655 aaKnown RBP15.67■□□□□ 0.1
SCFD1-224ENST00000557713 XPO4Q9C0E2 1151 aaKnown RBP15.67■□□□□ 0.1
SCFD1-224ENST00000557713 GLOD4Q9HC38 313 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 IFNKQ9P0W0 207 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 SEMA5BQ9P283 1151 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 ANKMY1Q9P2S6 941 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 PCDHB3Q9Y5E6 796 aa15.67■□□□□ 0.1
SCFD1-224ENST00000557713 K7EM74 188 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 SPAG6O75602 509 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 RASSF9O75901 435 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 NDUFA10O95299 355 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 RECKO95980 971 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 SLC4A1P02730 911 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 ERV3-1Q14264 604 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms