RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, human

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB11-213	ENST00000557685	WBP11	Q9Y2W2	641 aa	Known RBP	4.28	□□□□□ -1.72
EFCAB11-213	ENST00000557685	PCDHGA5	Q9Y5G8	931 aa		4.28	□□□□□ -1.72
EFCAB11-213	ENST00000557685	TRPV2	Q9Y5S1	764 aa		4.28	□□□□□ -1.72
EFCAB11-213	ENST00000557685	PTPRC	P08575	1304 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	IGLV5-37	A0A075B6J1	123 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	MAGEB17	A8MXT2	336 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685		H0YIN7	160 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685		J3QR06	171 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	MID1	O15344	667 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	NDUFS4	O43181	175 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ZNF12	P17014	697 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	S1PR1	P21453	382 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ITGB8	P26012	769 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	EEF1D	P29692	281 aa	Known RBP	4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CTSC	P53634	463 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CLDN20	P56880	219 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	LINC00205	P59089	165 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	SEC61A1	P61619	476 aa	Known RBP	4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	UBXN2A	P68543	259 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	PPP2R2B	Q00005	443 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	MYBPH	Q13203	477 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	NFATC4	Q14934	902 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TCP11X2	Q5H9J9	407 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ERMARD	Q5T6L9	678 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	FAM109B	Q6ICB4	259 aa	Predicted RBP	4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	RHBDF2	Q6PJF5	856 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ZNF534	Q76KX8	674 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TDRD5	Q8NAT2	981 aa	Known RBP	4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TSPAN14	Q8NG11	270 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	OR5R1	Q8NH85	324 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	HMGCLL1	Q8TB92	370 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	PTER	Q96BW5	349 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	PGAP3	Q96FM1	320 aa	Predicted RBP	4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	DGAT2	Q96PD7	388 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CCDC106	Q9BWC9	280 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	OR10A4	Q9H209	315 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	SLCO5A1	Q9H2Y9	848 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CRNN	Q9UBG3	495 aa	Predicted RBP	4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	GIMAP2	Q9UG22	337 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	PADI3	Q9ULW8	664 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ZNF711	Q9Y462	761 aa		4.27	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ASTN2	O75129	1339 aa	Predicted RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	LILRA5	A6NI73	299 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	PROB1	E7EW31	1015 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685		H7C0S8	307 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ZBTB43	O43298	467 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	APOA4	P06727	396 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	VPREB1	P12018	145 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	GJA1	P17302	382 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	KCNA5	P22460	613 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	NMBR	P28336	390 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CORO1A	P31146	461 aa	Known RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	POLG	P54098	1239 aa	Predicted RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TUBA1B	P68363	451 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	GAGE2B	Q13066	116 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	SNTB1	Q13884	538 aa	Known RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CRY2	Q49AN0	593 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	GAGE2E	Q4V326	116 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	FAM98B	Q52LJ0	330 aa	Known RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	SETMAR	Q53H47	684 aa	Predicted RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	GAGE2A	Q6NT46	116 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TRNP1	Q6NT89	227 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ATG9A	Q7Z3C6	839 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	HAUS6	Q7Z4H7	955 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ADHFE1	Q8IWW8	467 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	PM20D2	Q8IYS1	436 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	RNF113B	Q8IZP6	322 aa	Known RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	SLC5A8	Q8N695	610 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ACVR1C	Q8NER5	493 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TMED6	Q8WW62	240 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	LPGAT1	Q92604	370 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ABTB1	Q969K4	478 aa	Predicted RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	PIGT	Q969N2	578 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	RADIL	Q96JH8	1075 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	NEK1	Q96PY6	1258 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	SMC6	Q96SB8	1091 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	IL25	Q9H293	177 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TMEM30A	Q9NV96	361 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	OCIAD1	Q9NX40	245 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TAS2R14	Q9NYV8	317 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	RCC2	Q9P258	522 aa	Known RBP	4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	GAGE2D	Q9UEU5	116 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	SIX4	Q9UIU6	781 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	AMDHD2	Q9Y303	409 aa		4.26	□□□□□ -1.73
EFCAB11-213	ENST00000557685	PDS5A	Q29RF7	1337 aa	Known RBP	4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685		A0A1W2PP11	408 aa		4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TMEM189-UBE2V1	I3L0A0	370 aa		4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CLGN	O14967	610 aa		4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	IPO8	O15397	1037 aa	Known RBP	4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TBX10	O75333	385 aa		4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	KDM4B	O94953	1096 aa		4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	CAMTA2	O94983	1202 aa		4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ZWINT	O95229	277 aa		4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	ACAA1	P09110	424 aa	Predicted RBP	4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	LINC00271	P0C7V0	271 aa		4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	FCGR1A	P12314	374 aa		4.25	□□□□□ -1.73
EFCAB11-213	ENST00000557685	TMPO	P42166	694 aa	Known RBP	4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms