RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PSMA3P25788 255 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 GPR3P46089 330 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 NPY2RP49146 381 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 MAZP56270 477 aaKnown RBP12.31□□□□□ -0.44
SLIRP-209ENST00000557342 CACNG1Q06432 222 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 GPS1Q13098 491 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 TPSAB1Q15661 275 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 ZRANB3Q5FWF4 1079 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 TTC27Q6P3X3 843 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 ZNF438Q7Z4V0 828 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 CCNJLQ8IV13 435 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 RASGEF1AQ8N9B8 481 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 PPHLN1Q8NEY8 458 aaKnown RBP12.31□□□□□ -0.44
SLIRP-209ENST00000557342 PEX13Q92968 403 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 CNTNAP3BQ96NU0 1288 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
SLIRP-209ENST00000557342 CNTNAP3Q9BZ76 1288 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 LRRN3Q9H3W5 708 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 OSGEPL1Q9H4B0 414 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 BFARQ9NZS9 450 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 SAR1BQ9Y6B6 198 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 UNC13CQ8NB66 2214 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 KIR2DS5A0A0G2JLQ3 304 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 A0A0G2JNG1 304 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 C1QTNF9BB2RNN3 333 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 TMX2-CTNND1H3BSU7 103 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 KIR2DS3K7RE56 304 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-209ENST00000557342 GPR39O43194 453 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 SNX2O60749 519 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 CSO75390 466 aaKnown RBP12.3□□□□□ -0.44
SLIRP-209ENST00000557342 RPLP0P05388 317 aaKnown RBP12.3□□□□□ -0.44
SLIRP-209ENST00000557342 PROS1P07225 676 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 C1QTNF9P0C862 333 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 IDSP22304 550 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 GRIA1P42261 906 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 FASLGP48023 281 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 VPS41P49754 854 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 CLDN6P56747 220 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 KIR2DS5Q14953 304 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 NR1D2Q14995 579 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 TRIP13Q15645 432 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-209ENST00000557342 PLA2G4EQ3MJ16 856 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 PCID2Q5JVF3 399 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 TSTD2Q5T7W7 516 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 LRRC8BQ6P9F7 803 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 IYDQ6PHW0 289 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 TMEM220Q6QAJ8 160 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 SPRED1Q7Z699 444 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 SLC9B2Q86UD5 537 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 AMZ2Q86W34 360 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 ZNF547Q8IVP9 402 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 SFTPA2Q8IWL1 248 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 NXPE1Q8N323 547 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 SFRP1Q8N474 314 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 PATE1Q8WXA2 126 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.3□□□□□ -0.44
SLIRP-209ENST00000557342 SH3KBP1Q96B97 665 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 RUNDC3BQ96NL0 473 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 GFM1Q96RP9 751 aaKnown RBP12.3□□□□□ -0.44
SLIRP-209ENST00000557342 COPS8Q99627 209 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 NRSN2Q9GZP1 204 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 IL22Q9GZX6 179 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 SYNDIG1Q9H7V2 258 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 ZDHHC3Q9NYG2 299 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 SMARCAL1Q9NZC9 954 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 RNF14Q9UBS8 474 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 TBC1D29Q9UFV1 150 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 SLC23A2Q9UGH3 650 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 RABGEF1Q9UJ41 708 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 TCAF1Q9Y4C2 921 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 KNTC1P50748 2209 aa12.3□□□□□ -0.44
SLIRP-209ENST00000557342 NCOR2Q9Y618 2525 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 TRBV5-4A0A0C4DH59 114 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 A6NCN8 305 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 TRABD2BA6NFA1 517 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 OR2AG2A6NM03 316 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 CCL22O00626 93 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 POP7O75817 140 aaKnown RBP12.29□□□□□ -0.44
SLIRP-209ENST00000557342 ACRV1P26436 265 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 CA5AP35218 305 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 PAFAH1B1P43034 410 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 MAGEA6P43360 314 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 CTSCP53634 463 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 SESN2P58004 480 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-209ENST00000557342 CCL7P80098 99 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 B4GALNT1Q00973 533 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 DMPKQ09013 629 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 CLPPQ16740 277 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-209ENST00000557342 ISXQ2M1V0 245 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 BCL7AQ4VC05 210 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 CCDC38Q502W7 563 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 LYPLAL1Q5VWZ2 237 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 ARMC3Q5W041 872 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 AFTPHQ6ULP2 937 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 WASH2PQ6VEQ5 465 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 TAS2R42Q7RTR8 314 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 C11orf96Q7Z7L8 435 aa12.29□□□□□ -0.44
SLIRP-209ENST00000557342 MARCH9Q86YJ5 346 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms