RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 NKAPLQ5M9Q1 402 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CIR1Q86X95 450 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 TOMM5Q8N4H5 51 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 SLC4A5Q9BY07 1137 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 GNG13Q9P2W3 67 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ADGRE2Q9UHX3 823 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 WDR27A2RRH5 827 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 RENP00797 406 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 TGFB3P10600 412 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF20P17024 532 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF782Q6ZMW2 699 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CAPN14A8MX76 684 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 DISC1C4P0D8 188 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 PER1O15534 1290 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CABYRO75952 493 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 SCELO95171 688 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 AKT2P31751 481 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CREB5Q02930 508 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 SEC23BQ15437 767 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 PGAM4Q8N0Y7 254 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 MFSD2AQ8NA29 543 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 SH3RF3Q8TEJ3 882 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 TSNAXQ99598 290 aaKnown RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 MXRA8Q9BRK3 442 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CIPCQ9C0C6 399 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 PDE10AQ9Y233 779 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 MED31Q9Y3C7 131 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 SNX3O60493 162 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 TGM6O95932 706 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 SEPHS1P49903 392 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 GARNL3Q5VVW2 1013 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CHCHD4Q8N4Q1 142 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 PACRGLQ8N7B6 248 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 OR2AJ1Q8NGZ0 328 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 HCAR2Q8TDS4 363 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 MOAP1Q96BY2 351 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF717Q9BY31 904 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 FAM105AQ9NUU6 356 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CDH10Q9Y6N8 788 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 C1orf196B1AJZ1 125 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 HMGN1P05114 100 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 GKN3PP0CG01 181 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 HTR7P34969 479 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 GABRB2P47870 512 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 EFEMP1Q12805 493 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 RAPSNQ13702 412 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ERI1Q8IV48 349 aaKnown RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ZDHHC4Q9NPG8 344 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 EFCAB9A8MZ26 197 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 POLR1CO15160 346 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 PPM1AP35813 382 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CLCN2P51788 898 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF543Q08ER8 600 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 RAB39AQ14964 217 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 SSX6Q7RTT6 188 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ZSCAN4Q8NAM6 433 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CXorf40BQ96DE9 158 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 S100A16Q96FQ6 103 aaKnown RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 TREX2Q9BQ50 279 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 SAMD9Q5K651 1589 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ATP10BO94823 1461 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 A0A075B6Q4 140 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 RBL1P28749 1068 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 MAP3K8P41279 467 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 GRIA4P48058 902 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 DUSP4Q13115 394 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CCDC71Q8IV32 467 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ABRAQ8N0Z2 381 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 METTL25Q8N6Q8 603 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 UGGT1Q9NYU2 1555 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 ADGRL2O95490 1459 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CYB561D2O14569 222 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 LTFP02788 710 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 SLC35G4P0C7Q5 338 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 DDX6P26196 483 aaKnown RBP eCLIP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 APTXQ7Z2E3 356 aaKnown RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 MIB1Q86YT6 1006 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 AVL9Q8NBF6 648 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 METTL21AQ8WXB1 218 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 APBA2Q99767 749 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 GRID2O43424 1007 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CERCAMQ5T4B2 595 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 TATDN1Q6P1N9 297 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 IRF2BPLQ9H1B7 796 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 PCDHGA11Q9Y5H2 935 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 A0A1B0GVM2 712 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 TCAF2A6NFQ2 919 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CBX6O95503 412 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CDK2P24941 298 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ALDH3B2P48448 385 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ITGA7Q13683 1181 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 KCTD19Q17RG1 926 aaPredicted RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 WSCD2Q2TBF2 565 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 STRADAQ7RTN6 431 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ACBD4Q8NC06 268 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 COLEC10Q9Y6Z7 277 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ASCC3Q8N3C0 2202 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 MYMKA6NI61 221 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 DCLK1O15075 740 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms