RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 SPATA3Q8NHX4 192 aa12.26□□□□□ -0.45
PSEN1-220ENST00000557037 SNX21Q969T3 373 aa12.26□□□□□ -0.45
PSEN1-220ENST00000557037 CELF6Q96J87 481 aaKnown RBP12.26□□□□□ -0.45
PSEN1-220ENST00000557037 SMIM14Q96QK8 99 aa12.26□□□□□ -0.45
PSEN1-220ENST00000557037 MAP3K3Q99759 626 aa12.26□□□□□ -0.45
PSEN1-220ENST00000557037 TUBB2BQ9BVA1 445 aa12.26□□□□□ -0.45
PSEN1-220ENST00000557037 RIOK2Q9BVS4 552 aaKnown RBP12.26□□□□□ -0.45
PSEN1-220ENST00000557037 KLC4Q9NSK0 619 aa12.26□□□□□ -0.45
PSEN1-220ENST00000557037 EPHA6Q9UF33 1036 aa12.26□□□□□ -0.45
PSEN1-220ENST00000557037 TMEM59LQ9UK28 342 aa12.26□□□□□ -0.45
PSEN1-220ENST00000557037 PSMD11O00231 422 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 LCA5LO95447 670 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 SCNN1AP37088 669 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 TDGF1P3P51864 188 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 IST1P53990 364 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 CSNK1G2P78368 415 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 TMEM207Q6UWW9 146 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 SYTL1Q8IYJ3 562 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 EXD1Q8NHP7 514 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 CPT1BQ92523 772 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 ZNF501Q96CX3 271 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-220ENST00000557037 PCMTD1Q96MG8 357 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-220ENST00000557037 LRFN5Q96NI6 719 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 SPOCK3Q9BQ16 436 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 P4HTMQ9NXG6 502 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 SEMA5BQ9P283 1151 aa12.25□□□□□ -0.45
PSEN1-220ENST00000557037 RPH3AQ9Y2J0 694 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-220ENST00000557037 PDZK1P1A8MUH7 402 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 FANCGO15287 622 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 ALOX12BO75342 701 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 UNC5CO95185 931 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 DNAJA1P31689 397 aaKnown RBP12.24□□□□□ -0.45
PSEN1-220ENST00000557037 RORAP35398 523 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 CA7P43166 264 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 SYKP43405 635 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 GABRB2P47870 512 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 ABRQ12979 859 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 NCOA6Q14686 2063 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-220ENST00000557037 PRKD1Q15139 912 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-220ENST00000557037 PLA2G4EQ3MJ16 856 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 B3GNTL1Q67FW5 361 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-220ENST00000557037 FCRL6Q6DN72 434 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 CXXC5Q7LFL8 322 aaKnown RBP12.24□□□□□ -0.45
PSEN1-220ENST00000557037 UMODL1-AS1Q8N2C9 162 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 IP6K3Q96PC2 410 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 SMR3AQ99954 134 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 CRACR2AQ9BSW2 395 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 PDCL3Q9H2J4 239 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 SLC40A1Q9NP59 571 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 DLL4Q9NR61 685 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 METTL5Q9NRN9 209 aaKnown RBP12.24□□□□□ -0.45
PSEN1-220ENST00000557037 PCMTD2Q9NV79 361 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 VPS18Q9P253 973 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 CNOT6Q9ULM6 557 aaKnown RBP12.24□□□□□ -0.45
PSEN1-220ENST00000557037 BTRCQ9Y297 605 aa12.24□□□□□ -0.45
PSEN1-220ENST00000557037 OR52A4PA6NMU1 304 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 C9J4A7 227 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 HTRA2O43464 458 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-220ENST00000557037 CLDN14O95500 239 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 PNMA6AP0CW24 399 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-220ENST00000557037 CMA1P23946 247 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 PAPOLAP51003 745 aaKnown RBP12.23□□□□□ -0.45
PSEN1-220ENST00000557037 FOXL2P58012 376 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 AP1S1P61966 158 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 HSD11B2P80365 405 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 CCDC14Q49A88 953 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 ZNF648Q5T619 568 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-220ENST00000557037 LRRC66Q68CR7 880 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 ZNF324BQ6AW86 544 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-220ENST00000557037 FAAH2Q6GMR7 532 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 FBXO38Q6PIJ6 1188 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 ENOSF1Q7L5Y1 443 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 D2HGDHQ8N465 521 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 CATSPER1Q8NEC5 780 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 GPT2Q8TD30 523 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 RXFP2Q8WXD0 754 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 AGAP3Q96P47 875 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 TMEM121Q9BTD3 319 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 LRRC19Q9H756 370 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 ARFGAP3Q9NP61 516 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 ATP13A2Q9NQ11 1180 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 TRIM10Q9UDY6 481 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 HPSEQ9Y251 543 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 DNAJC16Q9Y2G8 782 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 PADI2Q9Y2J8 665 aa12.23□□□□□ -0.45
PSEN1-220ENST00000557037 TLN2Q9Y4G6 2542 aa12.22□□□□□ -0.45
PSEN1-220ENST00000557037 FBN1P35555 2871 aaKnown RBP12.22□□□□□ -0.45
PSEN1-220ENST00000557037 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-220ENST00000557037 UBA6A0AVT1 1052 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-220ENST00000557037 KLF7O75840 302 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-220ENST00000557037 IGHEP01854 428 aa12.22□□□□□ -0.45
PSEN1-220ENST00000557037 RPL10P27635 214 aaKnown RBP12.22□□□□□ -0.45
PSEN1-220ENST00000557037 SDC4P31431 198 aa12.22□□□□□ -0.45
PSEN1-220ENST00000557037 ARCN1P48444 511 aaKnown RBP12.22□□□□□ -0.45
PSEN1-220ENST00000557037 NDUFA8P51970 172 aa12.22□□□□□ -0.45
PSEN1-220ENST00000557037 SMSP52788 366 aa12.22□□□□□ -0.45
PSEN1-220ENST00000557037 SOX8P57073 446 aa12.22□□□□□ -0.45
PSEN1-220ENST00000557037 LRRC63Q05C16 580 aa12.22□□□□□ -0.45
PSEN1-220ENST00000557037 NSUN2Q08J23 767 aaKnown RBP eCLIP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms