RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 ABCB1P08183 1280 aaPredicted RBP3.68□□□□□ -1.82
GPHN-214ENST00000556633 LINC00271P0C7V0 271 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 VPREB1P12018 145 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 FCGR1AP12314 374 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 S1PR1P21453 382 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 NMBRP28336 390 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 TMPOP42166 694 aaKnown RBP3.68□□□□□ -1.82
GPHN-214ENST00000556633 MATR3P43243 847 aaKnown RBP eCLIP3.68□□□□□ -1.822e-6■■■■□ 21.6
GPHN-214ENST00000556633 ARSEP51690 589 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 BRWD1-AS2P59051 145 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 UBXN2AP68543 259 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 AIMP1Q12904 312 aaKnown RBP3.68□□□□□ -1.82
GPHN-214ENST00000556633 UBE2V1Q13404 147 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 SYT16Q17RD7 645 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 FAM98BQ52LJ0 330 aaKnown RBP3.68□□□□□ -1.82
GPHN-214ENST00000556633 ZDHHC20Q5W0Z9 365 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 RPUSD3Q6P087 351 aaKnown RBP3.68□□□□□ -1.82
GPHN-214ENST00000556633 INTS8Q75QN2 995 aaKnown RBP3.68□□□□□ -1.82
GPHN-214ENST00000556633 ATG9AQ7Z3C6 839 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 HAUS6Q7Z4H7 955 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 CEP97Q8IW35 865 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 PM20D2Q8IYS1 436 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 GUF1Q8N442 669 aaKnown RBP3.68□□□□□ -1.82
GPHN-214ENST00000556633 POGLUT1Q8NBL1 392 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 SLC38A9Q8NBW4 561 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 SMRP1Q8NCR6 262 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 SPATA22Q8NHS9 363 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 THAP6Q8TBB0 222 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 SLC38A5Q8WUX1 472 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 SLC44A1Q8WWI5 657 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 ZNF479Q96JC4 524 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 DGAT2Q96PD7 388 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 GFI1Q99684 422 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 SPATC1LQ9H0A9 340 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 IL25Q9H293 177 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 SLCO5A1Q9H2Y9 848 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 CHMP1AQ9HD42 196 aaPredicted RBP3.68□□□□□ -1.82
GPHN-214ENST00000556633 SMARCAL1Q9NZC9 954 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 ZNF224Q9NZL3 707 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 LARSQ9P2J5 1176 aaKnown RBP3.68□□□□□ -1.82
GPHN-214ENST00000556633 KCNS2Q9ULS6 477 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 PTPRCP08575 1304 aa3.68□□□□□ -1.82
GPHN-214ENST00000556633 SRRM3A6NNA2 597 aaPredicted RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 MAGEB17A8MXT2 336 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 H0YIN7 160 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 J3QR06 171 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 UBE2CO00762 179 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 SLC16A5O15375 505 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 NDUFS4O43181 175 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 DKC1O60832 514 aaKnown RBP eCLIP3.67□□□□□ -1.82
GPHN-214ENST00000556633 PMS2P2O95744 297 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 AFPP02771 609 aaKnown RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 NGFRP08138 427 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 GJA1P17302 382 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 KCNA5P22460 613 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 CAPZA2P47755 286 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 SEC61A1P61619 476 aaKnown RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 TUBA1BP68363 451 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 COG7P83436 770 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 LTBQ06643 244 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 DLG1Q12959 904 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 C9orf152Q5JTZ5 239 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 ERMARDQ5T6L9 678 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 DHRS7BQ6IAN0 325 aaPredicted RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 PDXDC1Q6P996 788 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 DENND5BQ6ZUT9 1274 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 CREB3L2Q70SY1 520 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 LDB1Q86U70 411 aaPredicted RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 GALNT13Q8IUC8 556 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 MAP7D3Q8IWC1 876 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 ODF3L1Q8IXM7 274 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 RNF113BQ8IZP6 322 aaKnown RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 SLC5A8Q8N695 610 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 GCSAMQ8N6F7 178 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 LPGAT1Q92604 370 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 PIGTQ969N2 578 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 PTERQ96BW5 349 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 TMEM19Q96HH6 336 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 CCDC106Q9BWC9 280 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 PPIL3Q9H2H8 161 aaKnown RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 MMP27Q9H306 513 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 KCNK15Q9H427 330 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 DENND2DQ9H6A0 471 aaPredicted RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 CFDP1Q9UEE9 299 aaPredicted RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 AMACRQ9UHK6 382 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 ZNF711Q9Y462 761 aa3.67□□□□□ -1.82
GPHN-214ENST00000556633 PDS5AQ29RF7 1337 aaKnown RBP3.67□□□□□ -1.82
GPHN-214ENST00000556633 A0A1W2PP11 408 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 LACTBL1A8MY62 500 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 ZNF500O60304 480 aaPredicted RBP3.66□□□□□ -1.82
GPHN-214ENST00000556633 PSMD10O75832 226 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 NTN1O95631 604 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 MYOD1P15172 320 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 NR2F2P24468 414 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 GNL1P36915 607 aaPredicted RBP3.66□□□□□ -1.82
GPHN-214ENST00000556633 PDLIM4P50479 330 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 PPP5CP53041 499 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 CTSCP53634 463 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 CD81P60033 236 aa3.66□□□□□ -1.82
GPHN-214ENST00000556633 SIRPAP78324 504 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms