RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PPARGP37231 505 aaPredicted RBP18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 PPP1R3AQ16821 1122 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 PPP2R2DQ66LE6 453 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 SFTPA1Q8IWL2 248 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 BPIFB1Q8TDL5 484 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 AGAP11Q8TF27 550 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 ASB16Q96NS5 453 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 LENG8Q96PV6 779 aaPredicted RBP18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 KCNA7Q96RP8 456 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 THTPAQ9BU02 230 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 MID1IP1Q9NPA3 183 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 ZMYM5Q9UJ78 669 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 GNPTGQ9UJJ9 305 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 PPIL1Q9Y3C6 166 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 PCDHB1Q9Y5F3 818 aa18.12■□□□□ 0.49
SDR39U1-220ENST00000556548 A0A1B0GTL3 188 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 ATP6AP2A0A1C7CYW4 349 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 TRPC5OSA6NMA1 111 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 ENTPD5O75356 428 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 ATP6AP2O75787 350 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 ADH1CP00326 375 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 COPAP53621 1224 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 RIPK1Q13546 671 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 NAA25Q14CX7 972 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 METTL21CQ5VZV1 264 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 UGT3A1Q6NUS8 523 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 GPSM1Q86YR5 675 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 NXPE1Q8N323 547 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 SFXN1Q9H9B4 322 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 CD274Q9NZQ7 290 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 FBXO10Q9UK96 956 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 COMMD10Q9Y6G5 202 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 TRBV5-4A0A0C4DH59 114 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 ANKRD33BA6NCL7 494 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 HEPACAM2A8MVW5 462 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 PRRT4C9JH25 899 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 CDK14O94921 469 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 FOXA1P55317 472 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 CBARPQ8N350 705 aaPredicted RBP18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 CMTM5Q96DZ9 223 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 L3MBTL1Q9Y468 752 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 ASB1Q9Y576 335 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 PTGDR2Q9Y5Y4 395 aa18.11■□□□□ 0.49
SDR39U1-220ENST00000556548 SYCE1LA8MT33 242 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 WASH3PC4AMC7 463 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 COX4I1P13073 169 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 ERFP50548 548 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 POLR2LP62875 67 aaKnown RBP18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 ARHGEF7Q14155 803 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 TLDC1Q6P9B6 456 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 DET1Q7L5Y6 550 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 SMARCD2Q92925 531 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 SCAMP4Q969E2 229 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 FAM161BQ96MY7 647 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 TRMOQ9BU70 441 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 ZDHHC4Q9NPG8 344 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 IL36AQ9UHA7 158 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 POU2F2P09086 479 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 HLA-EP13747 358 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 PIK3R1P27986 724 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 CPOXP36551 454 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 SPINT3P49223 89 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 CUL3Q13618 768 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 C18orf21Q32NC0 220 aaPredicted RBP18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 AFAP1L2Q8N4X5 818 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 ZNF483Q8TF39 744 aaPredicted RBP18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 CCDC28BQ9BUN5 200 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 PCDH12Q9NPG4 1184 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 PLA2G4CQ9UP65 541 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 SLC8A2Q9UPR5 921 aa18.1■□□□□ 0.49
SDR39U1-220ENST00000556548 ANTXRLA6NF34 631 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 LINC01565O15544 149 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 SNX2O60749 519 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 MTX2O75431 263 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 SNUPNO95149 360 aaKnown RBP18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 CD9P21926 228 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 RPS3P23396 243 aaKnown RBP eCLIP18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 CLCQ05315 142 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 GALNT1Q10472 559 aaPredicted RBP18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 GPR33Q49SQ1 333 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 ACSBG2Q5FVE4 666 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 HSD11B1LQ7Z5J1 315 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 SNX31Q8N9S9 440 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 SPATA16Q9BXB7 569 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 ELOVL2Q9NXB9 296 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 MBD1Q9UIS9 605 aaPredicted RBP18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 COPG1Q9Y678 874 aaKnown RBP18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 SCN8AQ9UQD0 1980 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 HOXC11O43248 304 aaPredicted RBP18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 TIMP2P16035 220 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 METAP1P53582 386 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 ST8SIA6P61647 398 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 KPNB1Q14974 876 aaKnown RBP18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 E2F5Q15329 346 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 TGFBIQ15582 683 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 BRAT1Q6PJG6 821 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 FRA10AC1Q70Z53 315 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 SNX32Q86XE0 403 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 DCBLD1Q8N8Z6 715 aa18.09■□□□□ 0.49
SDR39U1-220ENST00000556548 CEP70Q8NHQ1 597 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms