RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FAM221BA6H8Z2 402 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 CCL22O00626 93 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 GRID2O43424 1007 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 SGTAO43765 313 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 VEGFDO43915 354 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 NOBOXO60393 691 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 MTX2O75431 263 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 TRIM16O95361 564 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 PRAMEF1O95521 474 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 TOP3BO95985 862 aaKnown RBP9.53□□□□□ -0.88
SRP54-210ENST00000556380 ADRA1DP25100 572 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 AK4P27144 223 aaPredicted RBP9.53□□□□□ -0.88
SRP54-210ENST00000556380 HADHAP40939 763 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 NPY2RP49146 381 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 LMAN1P49257 510 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 VPS41P49754 854 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 TMPRSS15P98073 1019 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 ACVR1Q04771 509 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 TMEM115Q12893 351 aaPredicted RBP9.53□□□□□ -0.88
SRP54-210ENST00000556380 NFATC2Q13469 925 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 ITGA9Q13797 1035 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 LRP8Q14114 963 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 CCDC38Q502W7 563 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 LDLRAP1Q5SW96 308 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 GPRC6AQ5T6X5 926 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 ANKRD22Q5VYY1 191 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 LRRC8BQ6P9F7 803 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 SYT10Q6XYQ8 523 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 PPP1R21Q6ZMI0 780 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 TAF8Q7Z7C8 310 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 C11orf96Q7Z7L8 435 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 GALNT13Q8IUC8 556 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 PHYKPLQ8IUZ5 450 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 DNAAF3Q8N9W5 541 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 KYQ8NBH2 561 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 FAM46DQ8NEK8 389 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 DDHD1Q8NEL9 900 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 OR13J1Q8NGT2 312 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 GRK7Q8WTQ7 553 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 ZNF778Q96MU6 729 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 CDK15Q96Q40 435 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 OR2M4Q96R27 311 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 GSDMCQ9BYG8 508 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 SUDS3Q9H7L9 328 aaPredicted RBP9.53□□□□□ -0.88
SRP54-210ENST00000556380 NCKIPSDQ9NZQ3 722 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 TAAR2Q9P1P5 351 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 SLC23A2Q9UGH3 650 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 SLC2A6Q9UGQ3 507 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 ZNHIT2Q9UHR6 403 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 GPR34Q9UPC5 381 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 APOBEC2Q9Y235 224 aaKnown RBP9.53□□□□□ -0.88
SRP54-210ENST00000556380 PRKAB1Q9Y478 270 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 GPSM3Q9Y4H4 160 aa9.53□□□□□ -0.88
SRP54-210ENST00000556380 ARHGEF17Q96PE2 2063 aaPredicted RBP9.52□□□□□ -0.88
SRP54-210ENST00000556380 IGLV3-16A0A075B6K0 115 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 HEATR9A2RTY3 570 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 CCDC162PA2VCL2 907 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 A6NCN8 305 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 TMEM63AO94886 807 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 CDK14O94921 469 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 ECEL1O95672 775 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 EML2O95834 649 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 PRSS56P0CW18 603 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 CASQ1P31415 396 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 MC4RP32245 332 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 CDKN1CP49918 316 aaPredicted RBP9.52□□□□□ -0.89
SRP54-210ENST00000556380 DUSP3P51452 185 aaPredicted RBP9.52□□□□□ -0.89
SRP54-210ENST00000556380 CLCNKAP51800 687 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 CTSCP53634 463 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 WDR4P57081 412 aaKnown RBP9.52□□□□□ -0.89
SRP54-210ENST00000556380 SESN2P58004 480 aaPredicted RBP9.52□□□□□ -0.89
SRP54-210ENST00000556380 BASP1P80723 227 aaKnown RBP9.52□□□□□ -0.89
SRP54-210ENST00000556380 SHC2P98077 582 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 B4GALNT1Q00973 533 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 FOXK2Q01167 660 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 ILF3Q12906 894 aaKnown RBP eCLIP9.52□□□□□ -0.899e-7■■■■□ 20.5
SRP54-210ENST00000556380 LAMB3Q13751 1172 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 PTK6Q13882 451 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 NR0B2Q15466 257 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 SMAD1Q15797 465 aaKnown RBP9.52□□□□□ -0.89
SRP54-210ENST00000556380 SKIDA1Q1XH10 827 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 GPR33Q49SQ1 333 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 PCID2Q5JVF3 399 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 TSTD2Q5T7W7 516 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 RNASEH2BQ5TBB1 312 aaKnown RBP9.52□□□□□ -0.89
SRP54-210ENST00000556380 GUSBP11Q6P575 273 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 NLRP9Q7RTR0 991 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 SNX20Q7Z614 316 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 PIANPQ8IYJ0 282 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 NXPE1Q8N323 547 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 CHCHD4Q8N4Q1 142 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 ARL10Q8N8L6 244 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 RASGEF1AQ8N9B8 481 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 NAT8LQ8N9F0 302 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 MCUQ8NE86 351 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 SCG3Q8WXD2 468 aaKnown RBP9.52□□□□□ -0.89
SRP54-210ENST00000556380 PEX13Q92968 403 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 CCDC97Q96F63 343 aaPredicted RBP9.52□□□□□ -0.89
SRP54-210ENST00000556380 FAM96AQ9H5X1 160 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms