RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 MRGPREQ86SM8 312 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ADGRG6Q86SQ4 1221 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TTC7BQ86TV6 843 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF410Q86VK4 478 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CAND1Q86VP6 1230 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 UNC93AQ86WB7 457 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CDR2LQ86X02 465 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 FBXO16Q8IX29 292 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 UNC5BQ8IZJ1 945 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 SIX6OS1Q8N1H7 587 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 KIAA1958Q8N8K9 716 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 DNAAF3Q8N9W5 541 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 COLGALT1Q8NBJ5 622 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CCNYQ8ND76 341 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 RDH11Q8TC12 318 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 SLC26A7Q8TE54 656 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ZFAND2BQ8WV99 257 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 FAM149B1Q96BN6 582 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TRIM43Q96BQ3 446 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ZG16BQ96DA0 208 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CERS2Q96G23 380 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CPB2Q96IY4 423 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 HIST1H2AHQ96KK5 128 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TNIP3Q96KP6 325 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 RPL10LQ96L21 214 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 LRGUKQ96M69 825 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF512Q96ME7 567 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TWNKQ96RR1 684 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 PCYT2Q99447 389 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 MNTQ99583 582 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CPNE1Q99829 537 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 HIST1H2AJQ99878 128 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CCDC106Q9BWC9 280 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 APOL6Q9BWW8 343 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 KLHL4Q9C0H6 718 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 MROH8Q9H579 483 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 LRRC40Q9H9A6 602 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 PLEKHA5Q9HAU0 1116 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CYP4F11Q9HBI6 524 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 S100A14Q9HCY8 104 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GPATCH2LQ9NWQ4 482 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 BFARQ9NZS9 450 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 NDUFA13Q9P0J0 144 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 EPS15L1Q9UBC2 864 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 CYTH4Q9UIA0 394 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 SIX4Q9UIU6 781 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 GJD2Q9UKL4 321 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 PRPF19Q9UMS4 504 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 ANKRD6Q9Y2G4 727 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 AFG3L2Q9Y4W6 797 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 SNX9Q9Y5X1 595 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 RAD54BQ9Y620 910 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.43□□□□□ -1.7
ATXN3-241ENST00000556374 FAM186AA6NE01 2351 aa4.43□□□□□ -1.7
ATXN3-241ENST00000556374 TRANK1O15050 2925 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 TPRP12270 2363 aaKnown RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 C5orf42Q9H799 3197 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 A0A087WZ62 844 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 WDR27A2RRH5 827 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CCDC160A6NGH7 325 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ERI2A8K979 691 aaKnown RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CXorf49A8MYA2 514 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CBX4O00257 560 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 EEF2KO00418 725 aaKnown RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 SLC22A2O15244 555 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 NCAM2O15394 837 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 MFSD11O43934 449 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CCNT2O60583 730 aaKnown RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 PLIN3O60664 434 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 HUS1O60921 280 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 SNNO75324 88 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 TBX10O75333 385 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 RECQL4O94761 1208 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ENDOD1O94919 500 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 C22orf31O95567 290 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CD4P01730 458 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ITGB1P05556 798 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 LYNP07948 512 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ITGA2BP08514 1039 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 THRAP10827 490 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CYP2C9P11712 490 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CPA3P15088 417 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CRABP2P29373 138 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ADRA1BP35368 520 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 NUDT2P50583 147 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF135P52742 658 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 LIMK2P53671 638 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 AIF1P55008 147 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 SLC12A2P55011 1212 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 TPI1P60174 286 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 COG7P83436 770 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CDC42EP1Q00587 391 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 GBE1Q04446 702 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 NIPAL4Q0D2K0 466 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 CDC16Q13042 620 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 PCBP1Q15365 356 aaKnown RBP eCLIP4.42□□□□□ -1.7
ATXN3-241ENST00000556374 UGP2Q16851 508 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ANO4Q32M45 955 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 HSDL1Q3SXM5 330 aa4.42□□□□□ -1.7
ATXN3-241ENST00000556374 ARL13BQ3SXY8 428 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms