RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PCDHB1Q9Y5F3 818 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 OBSL1O75147 1896 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 TRBV5-4A0A0C4DH59 114 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 CAPN8A6NHC0 703 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 A8MT66 165 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 AGAP14A8MT82 685 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 H3BMM5 538 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 HGSO14964 777 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 GSC2O15499 205 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 GRID2O43424 1007 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 KLK8O60259 260 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 SMIM24O75264 130 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 VPS26AO75436 327 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 SRP72O76094 671 aaKnown RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 RHOBTB1O94844 696 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 PIGNO95427 931 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 CBX6O95503 412 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 GHRHP01286 108 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 FGF4P08620 206 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 KRT16P08779 473 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 FMO4P31512 558 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 HNRNPH1P31943 449 aaKnown RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 HNF1BP35680 557 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 PGGT1BP53609 377 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 POLR2LP62875 67 aaKnown RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 SATB1Q01826 763 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 RAD51Q06609 339 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 GPM6BQ13491 265 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 CRY1Q16526 586 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 FUT11Q495W5 492 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 CFAP157Q5JU67 520 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 SH2D4BQ5SQS7 431 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 ZDHHC20Q5W0Z9 365 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 FBXW10Q5XX13 1052 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 SEL1L3Q68CR1 1132 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 GRAMD4Q6IC98 578 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 UGT3A1Q6NUS8 523 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 C22orf39Q6P5X5 142 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 SNX20Q7Z614 316 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 GRASPQ7Z6J2 395 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 TTC7BQ86TV6 843 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 ADIPOR2Q86V24 386 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 TMPRSS6Q8IU80 811 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 PIANPQ8IYJ0 282 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 AHI1Q8N157 1196 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 SPATA6LQ8N4H0 392 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 CPSF7Q8N684 471 aaKnown RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 EFHBQ8N7U6 833 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 KDM1BQ8NB78 822 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 CFAP61Q8NHU2 1237 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 STAG3L4Q8TBR4 150 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 UTP4Q969X6 686 aaKnown RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 LRIG1Q96JA1 1093 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 BBS2Q9BXC9 721 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 C1QTNF3Q9BXJ4 246 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 TM6SF2Q9BZW4 377 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 LINC00597Q9H2U6 94 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 IL26Q9NPH9 171 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 PLK2Q9NYY3 685 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 KLHL42Q9P2K6 505 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 HECAQ9UBI9 543 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 SLC25A13Q9UJS0 675 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 TRIM33Q9UPN9 1127 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 FNDC3AQ9Y2H6 1198 aaKnown RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 MRPS23Q9Y3D9 190 aaKnown RBP8.23□□□□□ -1.09
ATXN3-235ENST00000556082 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 SLC30A1Q9Y6M5 507 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 BRCA2P51587 3418 aa8.23□□□□□ -1.09
ATXN3-235ENST00000556082 TSPAN11A1L157 253 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 TRPC5OSA6NMA1 111 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 SYCE1LA8MT33 242 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 DLL1O00548 723 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 PRMT5O14744 637 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-235ENST00000556082 GYG2O15488 501 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 HOXC11O43248 304 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-235ENST00000556082 ZBTB14O43829 449 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 MAGEC1O60732 1142 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 DIAPH2O60879 1101 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 MMP20O60882 483 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 KERAO60938 352 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 PRAMEF12O95522 483 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 ASLP04424 464 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 CHRNGP07510 517 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 SRPRAP08240 638 aaKnown RBP8.22□□□□□ -1.09
ATXN3-235ENST00000556082 CISD3P0C7P0 127 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 MTHFD2P13995 350 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 TYRP14679 529 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 SP100P23497 879 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-235ENST00000556082 MPSTP25325 297 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 KCNC1P48547 511 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 HERVK_113P63132 956 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 MLLT1Q03111 559 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-235ENST00000556082 LRP8Q14114 963 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 OCLNQ16625 522 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 DUSP6Q16828 381 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 WASHC2DQ5SRD0 308 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 LY6G5CQ5SRR4 150 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 BRAT1Q6PJG6 821 aa8.22□□□□□ -1.09
ATXN3-235ENST00000556082 PAQR3Q6TCH7 311 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms