RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ZNF7P17097 686 aaPredicted RBP14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 BPIP17213 487 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 KDELR1P24390 212 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MC1RQ01726 317 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 FILIP1LQ4L180 1135 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 C6orf15Q6UXA7 325 aaPredicted RBP14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PRSS42Q7Z5A4 293 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PHYKPLQ8IUZ5 450 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TRAM1L1Q8N609 369 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 KCTD6Q8NC69 237 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 OLFM3Q96PB7 478 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TGM7Q96PF1 710 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 OR6C1Q96RD1 312 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 RUFY1Q96T51 708 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TIMM29Q9BSF4 260 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ZSCAN5AQ9BUG6 496 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SPATA16Q9BXB7 569 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 OSGEPL1Q9H4B0 414 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 STN1Q9H668 368 aaKnown RBP14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MAGEE1Q9HCI5 957 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 EPHA6Q9UF33 1036 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CAPN11Q9UMQ6 739 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PCDHGA6Q9Y5G7 932 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 BZW2Q9Y6E2 419 aaKnown RBP14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PCSK5Q92824 1860 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ITPR2Q14571 2701 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 HIVEP3Q5T1R4 2406 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SMTNL1A8MU46 457 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GPR89AB7ZAQ6 455 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GYPCP04921 128 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GPR89BP0CG08 455 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MX2P20592 715 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CA4P22748 312 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 RPL10P27635 214 aaKnown RBP14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MAN1A1P33908 653 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SSR1P43307 286 aaKnown RBP14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CAPZBP47756 277 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PPM1FP49593 454 aaPredicted RBP14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 DRG2P55039 364 aaKnown RBP14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MLLT10P55197 1068 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 FOXM1Q08050 763 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ERV3-1Q14264 604 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GPR18Q14330 331 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 IL11RAQ14626 422 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SEPT7Q16181 437 aaKnown RBP14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 HADHQ16836 314 aaKnown RBP14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ASTE1Q2TB18 679 aaPredicted RBP14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ZNF569Q5MCW4 686 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 AGAP9Q5VTM2 703 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SLC9A4Q6AI14 798 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TCTN3Q6NUS6 607 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 NPNTQ6UXI9 565 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 WASH2PQ6VEQ5 465 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 B4GALNT4Q76KP1 1039 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CCNYQ8ND76 341 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SPATA22Q8NHS9 363 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CCHCR1Q8TD31 782 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GBP4Q96PP9 640 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 NAT10Q9H0A0 1025 aaKnown RBP14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 WASH6PQ9NQA3 447 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 DNAJC16Q9Y2G8 782 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ZNF711Q9Y462 761 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 KCTD3Q9Y597 815 aa14.11□□□□□ -0.15
CHMP4BP1-201ENST00000556017 NOTCH2Q04721 2471 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 IGHV5-51A0A0C4DH38 117 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 KMOO15229 486 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SPAG6O75602 509 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 DNAJB5O75953 348 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 NDUFA10O95299 355 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MBD3O95983 291 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MT-CYBP00156 380 aaPredicted RBP14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 VIPP01282 170 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 NELFEP18615 380 aaKnown RBP14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ZBED6P86452 979 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 KLRB1Q12918 225 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ATP13A5Q4VNC0 1218 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PDPK2PQ6A1A2 396 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CERS6Q6ZMG9 384 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 LRRTM4Q86VH4 590 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 AVL9Q8NBF6 648 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GPR150Q8NGU9 434 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ELMO2Q96JJ3 720 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ADGRE3Q9BY15 652 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TRIM55Q9BYV6 548 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 RAB33BQ9H082 229 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 POT1Q9NUX5 634 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TLK1Q9UKI8 766 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CENPEQ02224 2701 aa14.1□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SEC16AO15027 2179 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GAPDHSO14556 408 aaPredicted RBP14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GPR39O43194 453 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 VEGFDO43915 354 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 FOLR1P15328 257 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 HNRNPH3P31942 346 aaKnown RBP14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CD68P34810 354 aaPredicted RBP14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 NOP2P46087 812 aaKnown RBP14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PMS2P54278 862 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 FANCCQ00597 558 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 KCNAB1Q14722 419 aa14.09□□□□□ -0.15
CHMP4BP1-201ENST00000556017 NOMO1Q15155 1222 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms