RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 MPP3Q13368 585 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 XRCC4Q13426 336 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 MAP7Q14244 749 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 INSCQ1MX18 579 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 CRTC2Q53ET0 693 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 ANKS6Q68DC2 871 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 TMEM26Q6ZUK4 368 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 KDELC2Q7Z4H8 507 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 C11orf96Q7Z7L8 435 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 ZNF761Q86XN6 746 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 ZNF547Q8IVP9 402 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 CACNA2D3Q8IZS8 1091 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 IL22RA1Q8N6P7 574 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 TC2NQ8N9U0 490 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 EXTL1Q92935 676 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 RBM41Q96IZ5 413 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 CATSPER2Q96P56 530 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 QKIQ96PU8 341 aaKnown RBP eCLIP12.51□□□□□ -0.411e-7■■□□□ 11.5
HNRNPC-221ENST00000555883 ARHGAP9Q9BRR9 750 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 ZCCHC2Q9C0B9 1178 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 ADNPQ9H2P0 1102 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 PRDM8Q9NQV8 689 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 SAE1Q9UBE0 346 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC23A2Q9UGH3 650 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 TRHDEQ9UKU6 1024 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 SPO11Q9Y5K1 396 aa12.51□□□□□ -0.41
HNRNPC-221ENST00000555883 ZFC3H1O60293 1989 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 KLHL33A6NCF5 533 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 AGRPO00253 132 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 AURKAO14965 403 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 RAD1O60671 282 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 VIPP01282 170 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 ITGB6P18564 788 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 NFKB1P19838 968 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 IDSP22304 550 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 MAGEA1P43355 309 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 COPS2P61201 443 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 DMPKQ09013 629 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 ABHD18Q0P651 414 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 TMEM115Q12893 351 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC1A5Q15758 541 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 TBR1Q16650 682 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 ATP13A5Q4VNC0 1218 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 BBS12Q6ZW61 710 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 NLGN4XQ8N0W4 816 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 TTC30BQ8N4P2 665 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 NLGN4YQ8NFZ3 816 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 HTR3CQ8WXA8 447 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC45A3Q96JT2 553 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 MRGPRX2Q96LB1 330 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 C9orf72Q96LT7 481 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 C19orf43Q9BQ61 176 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 RAB33BQ9H082 229 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 OSGEPL1Q9H4B0 414 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC40A1Q9NP59 571 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 IL26Q9NPH9 171 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 SIDT1Q9NXL6 827 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 IL17CQ9P0M4 197 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 SCHIP1Q9P0W5 487 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 KLHL8Q9P2G9 620 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 ZNF624Q9P2J8 865 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 EPHA6Q9UF33 1036 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 TUBD1Q9UJT1 453 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 TMPRSS11EQ9UL52 423 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 HYOU1Q9Y4L1 999 aa12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 DNMT3AQ9Y6K1 912 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-221ENST00000555883 SDK2Q58EX2 2172 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 ZNF891A8MT65 544 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 APOC4-APOC2K7ER74 178 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 ZNF189O75820 626 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 UBXN7O94888 489 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 APOC2P02655 101 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC4A1P02730 911 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 LIFP15018 202 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 BRAFP15056 766 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 SPAM1P38567 509 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC19A1P41440 591 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 ADCY2Q08462 1091 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 ITGA9Q13797 1035 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 GTF2H3Q13889 308 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 KHDC1Q4VXA5 237 aaKnown RBP12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 SIRPB2Q5JXA9 342 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 LDLRAP1Q5SW96 308 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 ZNF648Q5T619 568 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 CRTC3Q6UUV7 619 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 PID1Q7Z2X4 250 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 PRSS42Q7Z5A4 293 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 TRIM48Q8IWZ4 208 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 ZNF567Q8N184 647 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 RNF214Q8ND24 703 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 DDHD1Q8NEL9 900 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 KIAA1143Q96AT1 154 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 OXNAD1Q96HP4 312 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms