RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZNF8P17098 575 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 GABRB3P28472 473 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 SPRP35270 261 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 MSH2P43246 934 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 POLD2P49005 469 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 BLKP51451 505 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 EIF3BP55884 814 aaKnown RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 NXPH1P58417 271 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 SRP54P61011 504 aaKnown RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 SMAD1Q15797 465 aaKnown RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 BCL7AQ4VC05 210 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 KHDC1Q4VXA5 237 aaKnown RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 UBAP2Q5T6F2 1119 aaKnown RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 TMEM220Q6QAJ8 160 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 KDM7AQ6ZMT4 941 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 MICALCLQ6ZW33 695 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 TRIM74Q86UV6 250 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 IQCKQ8N0W5 287 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 SLC22A18ASQ8N1D0 253 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 RASGEF1AQ8N9B8 481 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 SLC44A1Q8WWI5 657 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 SGF29Q96ES7 293 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 BIRC8Q96P09 236 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 MCMBPQ9BTE3 642 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 BOCQ9BWV1 1114 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 ROPN1BQ9BZX4 212 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 P2RY12Q9H244 342 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 CCDC68Q9H2F9 335 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 RHOJQ9H4E5 214 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 ROPN1Q9HAT0 212 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 FBXO6Q9NRD1 293 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-221ENST00000555773 KLQ9UEF7 1012 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 SLC24A2Q9UI40 661 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 GNPTGQ9UJJ9 305 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 ZNF180Q9UJW8 692 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 SLC6A14Q9UN76 642 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 ANKRD6Q9Y2G4 727 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 CRYL1Q9Y2S2 319 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 PSAT1Q9Y617 370 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 DGKBQ9Y6T7 804 aa12.31□□□□□ -0.44
SHMT2-221ENST00000555773 KMT2EQ8IZD2 1858 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 UBA6A0AVT1 1052 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-221ENST00000555773 KMOO15229 486 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 GRID2O43424 1007 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 DFNA5O60443 496 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 DNAJC6O75061 913 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 RASGRP1O95267 797 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 TNFP01375 233 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 INHBAP08476 426 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 PKMP14618 531 aaKnown RBP12.3□□□□□ -0.44
SHMT2-221ENST00000555773 CD9P21926 228 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 CNTFP26441 200 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 FMO4P31512 558 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 NBL1P41271 181 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 SERPINB9P50453 376 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 MPP1Q00013 466 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 PPARDQ03181 441 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 FZD2Q14332 565 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 RASA2Q15283 850 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 ZNF789Q5FWF6 425 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 ZNF648Q5T619 568 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-221ENST00000555773 PTRHD1Q6GMV3 140 aaKnown RBP12.3□□□□□ -0.44
SHMT2-221ENST00000555773 SLC23A3Q6PIS1 610 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 CNSTQ6PJW8 725 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 DOK6Q6PKX4 331 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 CROCCP2Q86T23 111 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 PARGQ86W56 976 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 ZC3HC1Q86WB0 502 aaKnown RBP12.3□□□□□ -0.44
SHMT2-221ENST00000555773 OXR1Q8N573 874 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 PNPLA1Q8N8W4 532 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 SUMF1Q8NBK3 374 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 LINC00615Q96LM1 132 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-221ENST00000555773 PANX3Q96QZ0 392 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 DHRS4Q9BTZ2 278 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 TMEM109Q9BVC6 243 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 TSSK1BQ9BXA7 367 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 ZDHHC5Q9C0B5 715 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 SMG5Q9UPR3 1016 aaKnown RBP12.3□□□□□ -0.44
SHMT2-221ENST00000555773 VWA7Q9Y334 891 aa12.3□□□□□ -0.44
SHMT2-221ENST00000555773 C17orf113A0A1B0GUU1 675 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 A0A1B0GVT2 93 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 PRSS38A1L453 326 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 POC1B-GALNT4F8VUJ3 575 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 KPNA5O15131 536 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 PIAS1O75925 651 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 KRT38O76015 456 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 FTH1P02794 183 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 FUCA1P04066 466 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 CSF2P04141 144 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 SKIV2L2P42285 1042 aaKnown RBP12.29□□□□□ -0.44
SHMT2-221ENST00000555773 CTSKP43235 329 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 PRLHRP49683 370 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 HK3P52790 923 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 LIMK2P53671 638 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 IFFO1Q0D2I5 559 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 EIF2B5Q13144 721 aaKnown RBP12.29□□□□□ -0.44
SHMT2-221ENST00000555773 LRP8Q14114 963 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 LPAL2Q16609 132 aa12.29□□□□□ -0.44
SHMT2-221ENST00000555773 ALG11Q2TAA5 492 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms