RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 DEFB124Q8NES8 71 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 GPBAR1Q8TDU6 330 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 CPT1BQ92523 772 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 SGSM3Q96HU1 749 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 CNDP2Q96KP4 475 aaKnown RBP10.48□□□□□ -0.73
TMEM260-206ENST00000555046 OR2M4Q96R27 311 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 KRT12Q99456 494 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 COPS8Q99627 209 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 OR2AG1Q9H205 316 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UGT1A7Q9HAW7 530 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UGT1A10Q9HAW8 530 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UGT1A8Q9HAW9 530 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 MRM3Q9HC36 420 aaKnown RBP10.48□□□□□ -0.73
TMEM260-206ENST00000555046 FGF22Q9HCT0 170 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UCKL1Q9NWZ5 548 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 CRLS1Q9UJA2 301 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UTP11Q9Y3A2 253 aaKnown RBP10.48□□□□□ -0.73
TMEM260-206ENST00000555046 NOTCH2Q04721 2471 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 ASCC3Q8N3C0 2202 aaKnown RBP10.48□□□□□ -0.73
TMEM260-206ENST00000555046 OR5K4A6NMS3 321 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 AGAP14A8MT82 685 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 FFAR2O15552 330 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 SIGLEC6O43699 453 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 DNAJC6O75061 913 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 GSTM1P09488 218 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 CKMT1AP12532 417 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 MC4RP32245 332 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 GRIA1P42261 906 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 PTGIRP43119 386 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 POLD2P49005 469 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 CLCNKAP51800 687 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 SIM1P81133 766 aaPredicted RBP10.47□□□□□ -0.73
TMEM260-206ENST00000555046 TMPRSS15P98073 1019 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 DAB2P98082 770 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 GSTM4Q03013 218 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 CALCOCO2Q13137 446 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 BIRC2Q13490 618 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 C1orf61Q13536 156 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 MORF4L2Q15014 288 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 NR0B2Q15466 257 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 ZRANB3Q5FWF4 1079 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 C6orf132Q5T0Z8 1188 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 ZNF449Q6P9G9 518 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 AFTPHQ6ULP2 937 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 ZNF572Q7Z3I7 529 aaPredicted RBP10.47□□□□□ -0.73
TMEM260-206ENST00000555046 ADGRG6Q86SQ4 1221 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 SDCCAG8Q86SQ7 713 aaPredicted RBP10.47□□□□□ -0.73
TMEM260-206ENST00000555046 LRRTM4Q86VH4 590 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 JAMLQ86YT9 394 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 RBFAQ8N0V3 343 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 PDIK1LQ8N165 341 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 BEND7Q8N7W2 519 aaPredicted RBP10.47□□□□□ -0.73
TMEM260-206ENST00000555046 OR13C4Q8NGS5 318 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 OR6P1Q8NGX9 317 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 NAT6Q93015 286 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 NAT9Q9BTE0 207 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 LRRC61Q9BV99 259 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 KIFC1Q9BW19 673 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 RAB17Q9H0T7 212 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 TMEM168Q9H0V1 697 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 DPEP2Q9H4A9 486 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 VPS37BQ9H9H4 285 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 MRPL40Q9NQ50 206 aaKnown RBP10.47□□□□□ -0.73
TMEM260-206ENST00000555046 PIH1D1Q9NWS0 290 aaKnown RBP10.47□□□□□ -0.73
TMEM260-206ENST00000555046 ATXN10Q9UBB4 475 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 FKBPLQ9UIM3 349 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 TCAF1Q9Y4C2 921 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 NEUROG3Q9Y4Z2 214 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 KCTD3Q9Y597 815 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 COL6A6A6NMZ7 2263 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 C2CD3Q4AC94 2353 aa10.47□□□□□ -0.73
TMEM260-206ENST00000555046 DOPEY2Q9Y3R5 2298 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 EFCAB8A8MWE9 144 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 TRIM38O00635 465 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 DNALI1O14645 258 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-206ENST00000555046 CHUKO15111 745 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 AP2A2O94973 939 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 TTC4O95801 387 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 GP1BAP07359 652 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 ZNF8P17098 575 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-206ENST00000555046 ACP1P24666 158 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 AKT1P31749 480 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 XIAPP98170 497 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 CTBSQ01459 385 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 CAV1Q03135 178 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 ACVR1Q04771 509 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 DEFB133Q30KQ1 61 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 PROX2Q3B8N5 592 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 CCDC38Q502W7 563 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 FASTKD1Q53R41 847 aaKnown RBP10.46□□□□□ -0.73
TMEM260-206ENST00000555046 GPRC6AQ5T6X5 926 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 OGFOD3Q6PK18 319 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 KDM7AQ6ZMT4 941 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 MARK2Q7KZI7 788 aaKnown RBP10.46□□□□□ -0.73
TMEM260-206ENST00000555046 CHST15Q7LFX5 561 aaPredicted RBP10.46□□□□□ -0.73
TMEM260-206ENST00000555046 NXPE1Q8N323 547 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 MPP5Q8N3R9 675 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 ARL10Q8N8L6 244 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 NAT8LQ8N9F0 302 aa10.46□□□□□ -0.73
TMEM260-206ENST00000555046 OR4L1Q8NH43 312 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms