RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 GNPDA1P46926 289 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PGM5Q15124 567 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 DLG2Q15700 870 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 HECTD2Q5U5R9 776 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 CHST9Q7L1S5 443 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 SLC5A5Q92911 643 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ETNK2Q9NVF9 386 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF490Q9ULM2 529 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 SPATA31A3Q5VYP0 1347 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PDCD5O14737 125 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 SSX5O60225 188 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 GNSP15586 552 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 VEGFAP15692 232 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PECAM1P16284 738 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 CNTN2Q02246 1040 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PLEKHG4Q58EX7 1191 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PNLDC1Q8NA58 520 aaKnown RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 NXPE2Q96DL1 559 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 MYH1P12882 1939 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 MYH2Q9UKX2 1941 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 MYH4Q9Y623 1939 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 DDX3YO15523 660 aaKnown RBP6.84□□□□□ -1.32
SYNE2-216ENST00000555002 PER1O15534 1290 aaPredicted RBP6.84□□□□□ -1.32
SYNE2-216ENST00000555002 FKTNO75072 461 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 SLC22A3O75751 556 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 PER3P56645 1201 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 BICRALQ6AI39 1079 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 TTI2Q6NXR4 508 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 RHBDF2Q6PJF5 856 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 PCDH19Q8TAB3 1148 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 PPM1MQ96MI6 270 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 DEFB118Q96PH6 123 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 SRMSQ9H3Y6 488 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 VNN3Q9NY84 501 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 UPB1Q9UBR1 384 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 ERVW-1Q9UQF0 538 aa6.84□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF878C9JN71 531 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CDK16Q00536 496 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 HYAL2Q12891 473 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 DPYSL3Q14195 570 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF410Q86VK4 478 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PLCZ1Q86YW0 608 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 TC2NQ8N9U0 490 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 GALNT11Q8NCW6 608 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 RBM18Q96H35 190 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF570Q96NI8 536 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PLK2Q9NYY3 685 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PRAMEF33A0A0G2JMD5 474 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 FAM240BA0A1B0GVZ2 78 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SLC31A1O15431 190 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CHST10O43529 356 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PRAMEF10O60809 474 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 FCER2P06734 321 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 TFEBP19484 476 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CLCN5P51795 746 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SLC25A3Q00325 362 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 MXD1Q05195 221 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 NFATC2Q13469 925 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 RBM39Q14498 530 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 LDLRAP1Q5SW96 308 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 AHSA2Q719I0 299 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CFAP206Q8IYR0 622 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 KCTD4Q8WVF5 259 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 TBCBQ99426 244 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 EGFL7Q9UHF1 273 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 HBS1LQ9Y450 684 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 DHRS12A0PJE2 317 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 GRM6O15303 877 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 NADKO95544 446 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 TRUB2O95900 331 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ATF4P18848 351 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 RBL1P28749 1068 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CMPK1P30085 196 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 YAP1P46937 504 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SLC26A2P50443 739 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SP3Q02447 781 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 AADACL4Q5VUY2 407 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 MLIPQ5VWP3 458 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ADAMTSL2Q86TH1 951 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 INO80EQ8NBZ0 244 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ASB12Q8WXK4 309 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CLP1Q92989 425 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 GTPBP3Q969Y2 492 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ZBTB45Q96K62 511 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 DUS2Q9NX74 493 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ADGRE2Q9UHX3 823 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 TRAFD1O14545 582 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 RENP00797 406 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PAEPP09466 180 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 GABRR2P28476 465 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 MAPK12P53778 367 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PDK3Q15120 406 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 AAGABQ6PD74 315 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 FAM13CQ8NE31 585 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PHF12Q96QT6 1004 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ISCA1Q9BUE6 129 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ACSS2Q9NR19 701 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 KLRF1Q9NZS2 232 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 POU2F3Q9UKI9 436 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF510Q9Y2H8 683 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms