RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 KRIT1O00522 736 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 PMM2O15305 246 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 MED7O43513 233 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 HSF2BPO75031 334 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 GSRP00390 522 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 CPP00450 1065 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 UGT2B4P06133 528 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 HOXC4P09017 264 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ZNF28P17035 718 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 KELP23276 732 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 OAS2P29728 719 aaKnown RBP4.83□□□□□ -1.64
ATXN3-229ENST00000554672 OR1E1P30953 314 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 MAN1A1P33908 653 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 GPR3P46089 330 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 CXCR3P49682 368 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 GEMIN4P57678 1058 aaKnown RBP4.83□□□□□ -1.64
ATXN3-229ENST00000554672 SNX16P57768 344 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 SNRPD1P62314 119 aaKnown RBP4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ARF5P84085 180 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 RAD51Q06609 339 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ABHD18Q0P651 414 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 CETN1Q12798 172 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 NME3Q13232 169 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 LSAMPQ13449 338 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 BIRC2Q13490 618 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 NR1D2Q14995 579 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 POLD3Q15054 466 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-229ENST00000554672 IRF4Q15306 451 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 TCEA2Q15560 299 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ARHGAP44Q17R89 818 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 WSCD2Q2TBF2 565 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 TMEM52BQ4KMG9 183 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ZCWPW2Q504Y3 356 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 SLC35F1Q5T1Q4 408 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 SPECC1LQ69YQ0 1117 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 DENND1BQ6P3S1 775 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 GDPD4Q6W3E5 623 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 KDELC2Q7Z4H8 507 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ZC3H18Q86VM9 953 aaKnown RBP4.83□□□□□ -1.64
ATXN3-229ENST00000554672 C17orf82Q86X59 251 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-229ENST00000554672 PPIL6Q8IXY8 311 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 NRSN1Q8IZ57 195 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 SLC34A3Q8N130 599 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 LGI4Q8N135 537 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 PPM1KQ8N3J5 372 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 OR7D4Q8NG98 312 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 OR4D9Q8NGE8 314 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 KIAA1524Q8TCG1 905 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 HCAR2Q8TDS4 363 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ZNF606Q8WXB4 792 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ART4Q93070 314 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 MBD6Q96DN6 1003 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 MOCOSQ96EN8 888 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 CCDC140Q96MF4 163 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 KLHL32Q96NJ5 620 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 NUDT22Q9BRQ3 303 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ZPBPQ9BS86 351 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 TKTL2Q9H0I9 626 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 UPF2Q9HAU5 1272 aaKnown RBP4.83□□□□□ -1.64
ATXN3-229ENST00000554672 METTL14Q9HCE5 456 aaKnown RBP4.83□□□□□ -1.64
ATXN3-229ENST00000554672 CASS4Q9NQ75 786 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 OCIAD1Q9NX40 245 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 DONSONQ9NYP3 566 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 RRN3Q9NYV6 651 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 MPP6Q9NZW5 540 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 DKK3Q9UBP4 350 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 ITM2BQ9Y287 266 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 DAAM1Q9Y4D1 1078 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 NPFFR2Q9Y5X5 522 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 NBPF19A0A087WUL8 3843 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 IGLV3-10A0A075B6K4 115 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 B4DGG1 531 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 H7BY64 318 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 CACNB4O00305 520 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 INPP4BO15327 924 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 SLC16A3O15427 465 aaKnown RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 SRGAP2O75044 1071 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 GRAP2O75791 330 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 CD160O95971 181 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 F9P00740 461 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 CALCAP01258 141 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 FGF1P05230 155 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 RNF224P0DH78 156 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 NR1D1P20393 614 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 XPAP23025 273 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 GKP32189 559 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 STAT1P42224 750 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 FKBP3Q00688 224 aaKnown RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 MC2RQ01718 297 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 GCNT1Q02742 428 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 GNA12Q03113 381 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 ELP6Q0PNE2 266 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 PDCLQ13371 301 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 MTM1Q13496 603 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 PEX6Q13608 980 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 EIF2S3LQ2VIR3 472 aaKnown RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 DCAF17Q5H9S7 520 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-229ENST00000554672 EMC4Q5J8M3 183 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 BRMS1LQ5PSV4 323 aa4.82□□□□□ -1.64
ATXN3-229ENST00000554672 C1QL3Q5VWW1 255 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms