RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 PFDN4Q9NQP4 134 aa11.6□□□□□ -0.55
SHMT2-212ENST00000554467 NPEPPSL1A6NEC2 478 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 HNF1BP35680 557 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 PRKAA2P54646 552 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 PPP1R3AQ16821 1122 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 CTSL3PQ5NE16 218 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 DNAJC5GQ8N7S2 189 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 SIKE1Q9BRV8 207 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 APOL5Q9BWW9 433 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 ZDHHC6Q9H6R6 413 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 KIAA1522Q9P206 1035 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-212ENST00000554467 PAIP2BQ9ULR5 123 aaKnown RBP11.59□□□□□ -0.55
SHMT2-212ENST00000554467 PKP3Q9Y446 797 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 DNAH14Q0VDD8 3507 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 AP1G1O43747 822 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 H2AFYO75367 372 aaKnown RBP11.59□□□□□ -0.55
SHMT2-212ENST00000554467 WISP3O95389 354 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-212ENST00000554467 LATS1O95835 1130 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 SRCP12931 536 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 CHN2P52757 468 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 LY6G5CQ5SRR4 150 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 ZNF783Q6ZMS7 281 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 FRMD7Q6ZUT3 714 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 Q6ZVU0 165 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 FAM217AQ8IXS0 508 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 DEFB107AQ8IZN7 70 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 DCBLD1Q8N8Z6 715 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 FIBINQ8TAL6 211 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 CYB5D2Q8WUJ1 264 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 RETREG1Q9H6L5 497 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 HECAQ9UBI9 543 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-212ENST00000554467 SSX2IPQ9Y2D8 614 aa11.59□□□□□ -0.55
SHMT2-212ENST00000554467 A0A1B0GTL3 188 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 SUPT3HB4E1H0 165 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 AIM2O14862 343 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 FZD6O60353 706 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 CYBBP04839 570 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 RBP1P09455 135 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 GFAPP14136 432 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 OGNP20774 298 aaKnown RBP11.58□□□□□ -0.55
SHMT2-212ENST00000554467 HOXD12P35452 270 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 KPNA2P52292 529 aaKnown RBP11.58□□□□□ -0.55
SHMT2-212ENST00000554467 C1QTNF8P60827 252 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 TLR1Q15399 786 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 SLC14A2Q15849 920 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 CUZD1Q86UP6 607 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 CPNE9Q8IYJ1 553 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 EEF1AKMT1Q8WVE0 214 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 PPP1R14BQ96C90 147 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 LENG8Q96PV6 779 aaPredicted RBP11.58□□□□□ -0.55
SHMT2-212ENST00000554467 KCNA7Q96RP8 456 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 S100A14Q9HCY8 104 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 TDP1Q9NUW8 608 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 IL17CQ9P0M4 197 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 GIMAP2Q9UG22 337 aa11.58□□□□□ -0.55
SHMT2-212ENST00000554467 A0A088AWK7 358 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 BTN3A1O00481 513 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 AGTR2P50052 363 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 ASPHQ12797 758 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 CYLC2Q14093 348 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-212ENST00000554467 PIWIL4Q7Z3Z4 852 aaKnown RBP11.58□□□□□ -0.56
SHMT2-212ENST00000554467 CHST14Q8NCH0 376 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 CEP70Q8NHQ1 597 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 FNDC8Q8TC99 324 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 TAS2R13Q9NYV9 303 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 C15orf38-AP3S2A0A0A6YYH1 394 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 NPIPB15A6NHN6 443 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-212ENST00000554467 PRAMEF1O95521 474 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 UGT2B4P06133 528 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 TYRP14679 529 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 CEBPBP17676 345 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 PTPN2P17706 415 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 AOC1P19801 751 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 COPAP53621 1224 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 XIAPP98170 497 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 GEN1Q17RS7 908 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 TRMT5Q32P41 509 aaKnown RBP11.58□□□□□ -0.56
SHMT2-212ENST00000554467 GRAMD1BQ3KR37 738 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 ARPINQ7Z6K5 226 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 DHDDSQ86SQ9 333 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 HPS6Q86YV9 775 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 GRIP2Q9C0E4 1043 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 KLHL4Q9C0H6 718 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 GSTO2Q9H4Y5 243 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 ZFYVE1Q9HBF4 777 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 FAIMQ9NVQ4 179 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 SPATA7Q9P0W8 599 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 ARHGAP26Q9UNA1 814 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 CDYLQ9Y232 598 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 SLC30A1Q9Y6M5 507 aa11.58□□□□□ -0.56
SHMT2-212ENST00000554467 E5RI56 91 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 CA3P07451 260 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 TCN1P20061 433 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-212ENST00000554467 CES1P23141 567 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 SH3BGRP55822 239 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-212ENST00000554467 KLF10Q13118 480 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 DCTN2Q13561 401 aaKnown RBP11.57□□□□□ -0.56
SHMT2-212ENST00000554467 SLC44A4Q53GD3 710 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 UNC50Q53HI1 259 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 TMC5Q6UXY8 1006 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms