RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PSMC3P17980 439 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PLCG1P19174 1290 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CSRP1P21291 193 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 G0S2P27469 103 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CASP1P29466 404 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CHRNA3P32297 505 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 FNTAP49354 379 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 HARS2P49590 506 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CCR4P51679 360 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 THOP1P52888 689 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 EPHA4P54764 986 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TUBA4AP68366 448 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CYP27A1Q02318 531 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ENPEPQ07075 957 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 MTAPQ13126 283 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TSTA3Q13630 321 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 THOC5Q13769 683 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 E2F2Q14209 437 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ZRSR1Q15695 479 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ZBTB6Q15916 424 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CLEC16AQ2KHT3 1053 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PGS1Q32NB8 556 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 LINC01559Q495D7 138 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GPAT3Q53EU6 434 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SPDYAQ5MJ70 313 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 VITQ6UXI7 678 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF813Q6ZN06 617 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TPRG1Q6ZUI0 275 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 BTLAQ7Z6A9 289 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GRASPQ7Z6J2 395 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ZBTB8OSQ8IWT0 167 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PHACTR4Q8IZ21 702 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ALDH16A1Q8IZ83 802 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TTC16Q8NEE8 873 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 OR10H5Q8NGA6 315 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 HASPINQ8TF76 798 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SLC13A3Q8WWT9 602 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GAB3Q8WWW8 586 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 KLHL6Q8WZ60 621 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 MR1Q95460 341 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 AZIN2Q96A70 460 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TMEM143Q96AN5 459 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 KTI12Q96EK9 354 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 C11orf24Q96F05 449 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 DYDC2Q96IM9 177 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 MIPEPQ99797 713 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 AARSD1Q9BTE6 412 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 RPP25Q9BUL9 199 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 C1QTNF2Q9BXJ5 285 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CACNG6Q9BXT2 260 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 FAM107BQ9H098 131 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SLC26A1Q9H2B4 701 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SNX25Q9H3E2 840 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ERVMER34-1Q9H9K5 563 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CYP3A43Q9HB55 503 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PIDD1Q9HB75 910 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 LZTFL1Q9NQ48 299 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 RBM12Q9NTZ6 932 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CCM2LQ9NUG4 571 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 KCND2Q9NZV8 630 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 VPS54Q9P1Q0 977 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TBX20Q9UMR3 447 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SOX13Q9UN79 622 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 AGAP1Q9UPQ3 857 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 COQ6Q9Y2Z9 468 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 DYRK1BQ9Y463 629 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CLDN16Q9Y5I7 305 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.7□□□□□ -1.986e-8■□□□□ 9.4
PRPF39-206ENST00000554429 NUP205Q92621 2012 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CEP192Q8TEP8 1941 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GVINP1Q7Z2Y8 2422 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 COL5A1P20908 1838 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 OR6C75A6NL08 312 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF879B4DU55 563 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 K7ERQ8 282 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF263O14978 683 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PIP5K1BO14986 540 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 DCLK1O15075 740 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ADAM12O43184 909 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PEX1O43933 1283 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CRTAPO75718 401 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CCNDBP1O95273 360 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 NDST3O95803 873 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 F12P00748 615 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 MPOP05164 745 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 NFICP08651 508 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PABPC1P11940 636 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 MYF5P13349 255 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CTRB1P17538 263 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CEBPBP17676 345 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SLC9A1P19634 815 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CDC25AP30304 524 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TRHRP34981 398 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GRK3P35626 688 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GARSP41250 739 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ALDH18A1P54886 795 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ADKP55263 362 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 NPEPPSP55786 919 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SNW1Q13573 536 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PDCD1Q15116 288 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms