RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 BOLA3Q53S33 107 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 RALGPS1Q5JS13 557 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 COLEC12Q5KU26 742 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 LRIG3Q6UXM1 1119 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 CEACAM20Q6UY09 585 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 ADAMTSL4Q6UY14 1074 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 RFLNAQ6ZTI6 216 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 CYP4V2Q6ZWL3 525 aaPredicted RBP8.76□□□□□ -1.01
TDP1-208ENST00000553989 H2AFVQ71UI9 128 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 CHST15Q7LFX5 561 aaPredicted RBP8.76□□□□□ -1.01
TDP1-208ENST00000553989 MAATS1Q7Z4T9 603 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 POLNQ7Z5Q5 900 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 SLC9B2Q86UD5 537 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 RETREG3Q86VR2 466 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 ARFGAP2Q8N6H7 521 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 C9orf43Q8TAL5 461 aaPredicted RBP8.76□□□□□ -1.01
TDP1-208ENST00000553989 NCSTNQ92542 709 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 SCAMP4Q969E2 229 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 CSPG4P5Q96PW8 444 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 MCCC1Q96RQ3 725 aaPredicted RBP8.76□□□□□ -1.01
TDP1-208ENST00000553989 NAP1L3Q99457 506 aaPredicted RBP8.76□□□□□ -1.01
TDP1-208ENST00000553989 EFHD1Q9BUP0 239 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 POLR1EQ9GZS1 481 aaKnown RBP8.76□□□□□ -1.01
TDP1-208ENST00000553989 EPN3Q9H201 632 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 ABCG8Q9H221 673 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 ALG2Q9H553 416 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 ZNF71Q9NQZ8 489 aaPredicted RBP8.76□□□□□ -1.01
TDP1-208ENST00000553989 ETNK2Q9NVF9 386 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 HAUS2Q9NVX0 235 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 PRKAB1Q9Y478 270 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 ST14Q9Y5Y6 855 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 BHMG1C9JSJ3 638 aaPredicted RBP8.75□□□□□ -1.01
TDP1-208ENST00000553989 AGPSO00116 658 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 NKX2-8O15522 239 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 SHOX2O60902 331 aaPredicted RBP8.75□□□□□ -1.01
TDP1-208ENST00000553989 PEX11BO96011 259 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 SOD1P00441 154 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 PDHA1P08559 390 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 RARAP10276 462 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 GZMAP12544 262 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 ACP5P13686 325 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 SLC2A4P14672 509 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 TCF4P15884 667 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 ZNF30P17039 623 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 MAP4P27816 1152 aaKnown RBP8.75□□□□□ -1.01
TDP1-208ENST00000553989 IL1R2P27930 398 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 GJC1P36383 396 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 FASLGP48023 281 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 C2orf54Q08AI8 447 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 CDC20Q12834 499 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 SEPT6Q14141 434 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 DESI1Q6ICB0 168 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 C16orf46Q6P387 395 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 ALKBH5Q6P6C2 394 aaKnown RBP8.75□□□□□ -1.01
TDP1-208ENST00000553989 B4GALNT4Q76KP1 1039 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 ZNF571Q7Z3V5 609 aaPredicted RBP8.75□□□□□ -1.01
TDP1-208ENST00000553989 TECPR1Q7Z6L1 1165 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 UNC5BQ8IZJ1 945 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 IQCKQ8N0W5 287 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 SFRP1Q8N474 314 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 LPCAT1Q8NF37 534 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 EXD1Q8NHP7 514 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 PIH1D2Q8WWB5 315 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 SH3KBP1Q96B97 665 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 LRRC45Q96CN5 670 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 RTP4Q96DX8 246 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 SMIM14Q96QK8 99 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 AGAP2Q99490 1192 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 SYT11Q9BT88 431 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 RIOK2Q9BVS4 552 aaKnown RBP8.75□□□□□ -1.01
TDP1-208ENST00000553989 OSGEPL1Q9H4B0 414 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 TUBD1Q9UJT1 453 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 DNPEPQ9ULA0 475 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 TTC7AQ9ULT0 858 aaPredicted RBP8.75□□□□□ -1.01
TDP1-208ENST00000553989 TFR2Q9UP52 801 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 KCNK6Q9Y257 313 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 CHKBQ9Y259 395 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 CAPN6Q9Y6Q1 641 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 HECTD1Q9ULT8 2610 aa8.75□□□□□ -1.01
TDP1-208ENST00000553989 ZFC3H1O60293 1989 aaKnown RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 A0A087X0T9 212 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 A0A0J9YYE9 177 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 C1orf232A0A0U1RR37 186 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 EBAG9O00559 213 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 DDX3XO00571 662 aaKnown RBP eCLIP8.74□□□□□ -1.01
TDP1-208ENST00000553989 POLR1CO15160 346 aaPredicted RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 STK17BO94768 372 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 CLDN7O95471 211 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 TRBC1P01850 177 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 FAM228BP0C875 321 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 GYS2P54840 703 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 MC1RQ01726 317 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 DSC2Q02487 901 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 PTSQ03393 145 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 FOXM1Q08050 763 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 SQSTM1Q13501 440 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 PIGHQ14442 188 aaPredicted RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 TCEAL1Q15170 157 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 NR6A1Q15406 480 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 DEFB109BQ30KR1 87 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms