RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 MAGI1Q96QZ7 1491 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-210ENST00000553693 HHLA1C9JL84 531 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 H0YIN7 160 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 PAGE4O60829 102 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 IPO7O95373 1038 aaKnown RBP3.7□□□□□ -1.82
SCFD1-210ENST00000553693 IGLV1-44P01699 117 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 PRSS56P0CW18 603 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 ERVK-10P10266 1014 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 PRCPP42785 496 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 F2RL1P55085 397 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 RPL7AP62424 266 aaKnown RBP3.7□□□□□ -1.82
SCFD1-210ENST00000553693 GNB1P62873 340 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 OLR1P78380 273 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 MRPS34P82930 218 aaKnown RBP3.7□□□□□ -1.82
SCFD1-210ENST00000553693 PNLIPRP3Q17RR3 467 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 KRT71Q3SY84 523 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 LCN10Q6JVE6 187 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 PACS1Q6VY07 963 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 CERS3Q8IU89 383 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 EXOC8Q8IYI6 725 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 DBF4BQ8NFT6 615 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 MYRIPQ8NFW9 859 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 WDR20Q8TBZ3 569 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 TMEM190Q8WZ59 177 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 MAP7D2Q96T17 732 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 PIP5K1AQ99755 562 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 PAIP1Q9H074 479 aaKnown RBP3.7□□□□□ -1.82
SCFD1-210ENST00000553693 BICC1Q9H694 974 aaKnown RBP3.7□□□□□ -1.82
SCFD1-210ENST00000553693 ZBTB20Q9HC78 741 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-210ENST00000553693 ADPRHL2Q9NX46 363 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 SAGE1Q9NXZ1 904 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 CWC15Q9P013 229 aaKnown RBP3.7□□□□□ -1.82
SCFD1-210ENST00000553693 ACAD8Q9UKU7 415 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 GRIN2BQ13224 1484 aa3.7□□□□□ -1.82
SCFD1-210ENST00000553693 IGKV3D-20A0A0C4DH25 116 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 C15orf62A8K5M9 175 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 PSMD14O00487 310 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 ZNF500O60304 480 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-210ENST00000553693 SLC25A12O75746 678 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 NR3C1P04150 777 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 DHX8Q14562 1220 aaKnown RBP3.69□□□□□ -1.82
SCFD1-210ENST00000553693 ZC2HC1CQ53FD0 456 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-210ENST00000553693 ZNF805Q5CZA5 627 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 Q75L30 129 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 KRTAP7-1Q8IUC3 87 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 PM20D2Q8IYS1 436 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 TSPYL6Q8N831 410 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 FCAMRQ8WWV6 532 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 INTS12Q96CB8 462 aaKnown RBP3.69□□□□□ -1.82
SCFD1-210ENST00000553693 MMABQ96EY8 250 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-210ENST00000553693 OXNAD1Q96HP4 312 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-210ENST00000553693 PCDHB16Q9NRJ7 776 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 C2orf42Q9NWW7 574 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 PDP2Q9P2J9 529 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 FBXW11Q9UKB1 542 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 CLIC4Q9Y696 253 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 KIF13AQ9H1H9 1805 aa3.69□□□□□ -1.82
SCFD1-210ENST00000553693 FGD5Q6ZNL6 1462 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 A0A0G2JNG1 304 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 C1orf226A1L170 272 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 MAP2K7O14733 419 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 DAB1O75553 588 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 EIF3JO75822 258 aaKnown RBP3.68□□□□□ -1.82
SCFD1-210ENST00000553693 CTSCP53634 463 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 MBTD1Q05BQ5 628 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 GOLGA8DPQ0D2H9 430 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 LRMPQ12912 555 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 CSTF3Q12996 717 aaKnown RBP3.68□□□□□ -1.82
SCFD1-210ENST00000553693 FRG1Q14331 258 aaKnown RBP3.68□□□□□ -1.82
SCFD1-210ENST00000553693 KIR2DS5Q14953 304 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 ADIPOQQ15848 244 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 ACAD10Q6JQN1 1059 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 ZNF497Q6ZNH5 498 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 HEATR4Q86WZ0 1026 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 SMAP1Q8IYB5 467 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-210ENST00000553693 EMC1Q8N766 993 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 PAF1Q8N7H5 531 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 RBM15BQ8NDT2 890 aaKnown RBP3.68□□□□□ -1.82
SCFD1-210ENST00000553693 TRIM58Q8NG06 486 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 METTL6Q8TCB7 284 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 SGCDQ92629 289 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 SEMA3CQ99985 751 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 AGXT2Q9BYV1 514 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 TMEM39BQ9GZU3 492 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 TRPC7Q9HCX4 862 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 COPG2Q9UBF2 871 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 NAALADL1Q9UQQ1 740 aa3.68□□□□□ -1.82
SCFD1-210ENST00000553693 COL2A1P02458 1487 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-210ENST00000553693 ATP2A1O14983 1001 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 PYGLP06737 847 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 UBL4AP11441 157 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 GNB3P16520 340 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 GNAZP19086 355 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 TFAP4Q01664 338 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 CDC16Q13042 620 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 ITGA9Q13797 1035 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 FAM53AQ6NSI3 398 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-210ENST00000553693 PLXDC2Q6UX71 529 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 SEPT14Q6ZU15 432 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 ANO5Q75V66 913 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms