RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 MRGPRG-AS1Q2M3A8 158 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 SIRPB2Q5JXA9 342 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 RARS2Q5T160 578 aaKnown RBP3.14□□□□□ -1.91
VRK1-202ENST00000553683 NSUN5P2Q63ZY6 315 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 ACSM2BQ68CK6 577 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 TMEM154Q6P9G4 183 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 ZNF449Q6P9G9 518 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 ATG9AQ7Z3C6 839 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 PXKQ7Z7A4 578 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 MCEMP1Q8IX19 187 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 SLC5A8Q8N695 610 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 WDSUB1Q8N9V3 476 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 HM13Q8TCT9 377 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 PPP4R1Q8TF05 950 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 ST6GAL2Q96JF0 529 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 PCYT2Q99447 389 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 POLR1BQ9H9Y6 1135 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 ZBTB20Q9HC78 741 aaPredicted RBP3.14□□□□□ -1.91
VRK1-202ENST00000553683 RRP7BPQ9NSQ0 103 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 SMC4Q9NTJ3 1288 aa3.14□□□□□ -1.91
VRK1-202ENST00000553683 OLA1Q9NTK5 396 aaKnown RBP3.14□□□□□ -1.91
VRK1-202ENST00000553683 MARCH4Q9P2E8 410 aaPredicted RBP3.14□□□□□ -1.91
VRK1-202ENST00000553683 ZNF644Q9H582 1327 aaPredicted RBP3.14□□□□□ -1.91
VRK1-202ENST00000553683 A0A0G2JNG1 304 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 CDRT15L2A8MXV6 281 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 ERVV-2B6SEH9 535 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 RNASEH2AO75792 299 aaKnown RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 TBX18O95935 607 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 TUBBP07437 444 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 NFKBIAP25963 317 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 ARL3P36405 182 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 GPR143P51810 404 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 CRIP2P52943 208 aaPredicted RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 TUBB4BP68371 445 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 AIMP2Q13155 320 aaKnown RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 DDX10Q13206 875 aaKnown RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 MAMLD1Q13495 774 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 KIR2DS5Q14953 304 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 ASPRV1Q53RT3 343 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 FAAH2Q6GMR7 532 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 PACS1Q6VY07 963 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 GALNT5Q7Z7M9 940 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 SDCCAG8Q86SQ7 713 aaPredicted RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 NGEFQ8N5V2 710 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 PAF1Q8N7H5 531 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 OR52I2Q8NH67 350 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 FAM76AQ8TAV0 307 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 HDAC2Q92769 488 aaKnown RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 LINGO1Q96FE5 620 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 MPP4Q96JB8 637 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 C1orf74Q96LT6 269 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 OR2A14Q96R47 310 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 NUDCD1Q96RS6 583 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 SEMA3CQ99985 751 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 RBM4Q9BWF3 364 aaKnown RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 SH2D4AQ9H788 454 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 C2orf42Q9NWW7 574 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 RCC2Q9P258 522 aaKnown RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 ORC3Q9UBD5 711 aaPredicted RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 DBNLQ9UJU6 430 aaKnown RBP3.13□□□□□ -1.91
VRK1-202ENST00000553683 NENFQ9UMX5 172 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 YIPF1Q9Y548 306 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 SESN1Q9Y6P5 492 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 PIAS3Q9Y6X2 628 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 ITIH6Q6UXX5 1313 aa3.13□□□□□ -1.91
VRK1-202ENST00000553683 MYO1GB0I1T2 1018 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 BLOC1S5-TXNDC5H3BN57 136 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 OGG1O15527 345 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 GPC4O75487 556 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 MBD4O95243 580 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 BAG4O95429 457 aaKnown RBP3.12□□□□□ -1.91
VRK1-202ENST00000553683 PAK4O96013 591 aaPredicted RBP3.12□□□□□ -1.91
VRK1-202ENST00000553683 MCCP23508 829 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 VEGFCP49767 419 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 COG7P83436 770 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 PPIGQ13427 754 aaKnown RBP eCLIP3.12□□□□□ -1.91
VRK1-202ENST00000553683 EIF4A2Q14240 407 aaKnown RBP3.12□□□□□ -1.91
VRK1-202ENST00000553683 TMEM30BQ3MIR4 351 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 CEP85LQ5SZL2 805 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 LRIF1Q5T3J3 769 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 STXBP5Q5T5C0 1151 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 RASGEF1CQ8N431 466 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 PDILTQ8N807 584 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 TEX19Q8NA77 164 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 OR8K5Q8NH50 307 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 SLC44A1Q8WWI5 657 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 LGALS12Q96DT0 336 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 WDFY2Q96P53 400 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 F2RL3Q96RI0 385 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 PIGMQ9H3S5 423 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 MAP3K20Q9NYL2 800 aaKnown RBP3.12□□□□□ -1.91
VRK1-202ENST00000553683 ACAD8Q9UKU7 415 aa3.12□□□□□ -1.91
VRK1-202ENST00000553683 EXO1Q9UQ84 846 aaKnown RBP3.12□□□□□ -1.91
VRK1-202ENST00000553683 TMEM8BA6NDV4 472 aa3.11□□□□□ -1.91
VRK1-202ENST00000553683 PMS2P5A8MQ11 134 aa3.11□□□□□ -1.91
VRK1-202ENST00000553683 CD4P01730 458 aa3.11□□□□□ -1.91
VRK1-202ENST00000553683 AMBPP02760 352 aa3.11□□□□□ -1.91
VRK1-202ENST00000553683 TFAP2AP05549 437 aa3.11□□□□□ -1.91
VRK1-202ENST00000553683 SRPRAP08240 638 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms