RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 CRY1Q16526 586 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 HABP4Q5JVS0 413 aaKnown RBP12.55□□□□□ -0.4
CACNB3-223ENST00000552480 PIP5KL1Q5T9C9 394 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 SDE2Q6IQ49 451 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 CPNE9Q8IYJ1 553 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 CLDN19Q8N6F1 224 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 OR2T3Q8NH03 318 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 RFWD2Q8NHY2 731 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 STAG3L4Q8TBR4 150 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 LKAAEAR1Q8TD35 194 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 CXorf40AQ8TE69 158 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 EEF1AKMT1Q8WVE0 214 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 AP2M1Q96CW1 435 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 LINGO1Q96FE5 620 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 DCUN1D1Q96GG9 259 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 MSANTD3Q96H12 275 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 PDLIM5Q96HC4 596 aaKnown RBP12.55□□□□□ -0.4
CACNB3-223ENST00000552480 PANX3Q96QZ0 392 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 ATOH8Q96SQ7 321 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 SORT1Q99523 831 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 SIKE1Q9BRV8 207 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 DRC3Q9H069 523 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 SARS2Q9NP81 518 aaKnown RBP12.55□□□□□ -0.4
CACNB3-223ENST00000552480 HEBP1Q9NRV9 189 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 DNAJC16Q9Y2G8 782 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 FADS3Q9Y5Q0 445 aa12.55□□□□□ -0.4
CACNB3-223ENST00000552480 CKAP5Q14008 2032 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 NPEPPSL1A6NEC2 478 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 CCT8L1PA6NM43 557 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 SYCE1LA8MT33 242 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 FADS2P1A8MWK0 482 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 BTN3A1O00481 513 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 NEMP1O14524 444 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 MID1O15344 667 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 TNRC18O15417 2968 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-223ENST00000552480 MMP20O60882 483 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 AP2A2O94973 939 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 SLC25A14O95258 325 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-223ENST00000552480 TRIM16O95361 564 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 ATP1B2P14415 290 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-223ENST00000552480 AKT1P31749 480 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 DRD3P35462 400 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 KCNC1P48547 511 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 RGS4P49798 205 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 ARFIP2P53365 341 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 COPAP53621 1224 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 NAGLUP54802 743 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 HNRNPH2P55795 449 aaKnown RBP12.54□□□□□ -0.4
CACNB3-223ENST00000552480 CCDC15Q0P6D6 951 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 STARD3Q14849 445 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 SMAD2Q15796 467 aaKnown RBP12.54□□□□□ -0.4
CACNB3-223ENST00000552480 LDLRAP1Q5SW96 308 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 TRIM67Q6ZTA4 783 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 PIWIL4Q7Z3Z4 852 aaKnown RBP12.54□□□□□ -0.4
CACNB3-223ENST00000552480 YTHDF3Q7Z739 585 aaKnown RBP12.54□□□□□ -0.4
CACNB3-223ENST00000552480 NLRP8Q86W28 1048 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 AADATQ8N5Z0 425 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 ZBTB2Q8N680 514 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 PIWIL2Q8TC59 973 aaKnown RBP12.54□□□□□ -0.4
CACNB3-223ENST00000552480 BTN2A2Q8WVV5 523 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 NUS1Q96E22 293 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 TMEM120AQ9BXJ8 343 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 KCNK13Q9HB14 408 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 SPATS2LQ9NUQ6 558 aaKnown RBP12.54□□□□□ -0.4
CACNB3-223ENST00000552480 KCNK4Q9NYG8 393 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 NCKIPSDQ9NZQ3 722 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 IKZF3Q9UKT9 509 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 RNF112Q9ULX5 631 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 TMCO1Q9UM00 188 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 COQ6Q9Y2Z9 468 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 PDE4DIPQ5VU43 2346 aa12.54□□□□□ -0.4
CACNB3-223ENST00000552480 A0A0G2JND7 137 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 NEMP2A6NFY4 417 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 EIF3FO00303 357 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-223ENST00000552480 CDC7O00311 574 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 QSOX1O00391 747 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 TSPAN6O43657 245 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 LZTS3O60299 673 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-223ENST00000552480 DCTN3O75935 186 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 RECQL5O94762 991 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-223ENST00000552480 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 KLF8O95600 359 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-223ENST00000552480 CBSLP0DN79 551 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 ITGB6P18564 788 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 MSH3P20585 1137 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 DGKAP23743 735 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 CBSP35520 551 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 HK2P52789 917 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 RPS14P62263 151 aaKnown RBP12.53□□□□□ -0.4
CACNB3-223ENST00000552480 MRPS21P82921 87 aaKnown RBP12.53□□□□□ -0.4
CACNB3-223ENST00000552480 DPTQ07507 201 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 TSNQ15631 228 aaKnown RBP12.53□□□□□ -0.4
CACNB3-223ENST00000552480 TTLL9Q3SXZ7 439 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 C2orf27AQ580R0 203 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 CFAP157Q5JU67 520 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 ATG14Q6ZNE5 492 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 CCDC121Q6ZUS5 278 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 TRPM8Q7Z2W7 1104 aa12.53□□□□□ -0.4
CACNB3-223ENST00000552480 RAB44Q7Z6P3 723 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms