RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 PHPT1Q9NRX4 125 aaPredicted RBP8.09□□□□□ -1.11
CHPT1-208ENST00000552215 WASF2Q9Y6W5 498 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 SPTBP11277 2137 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 H3BM21 787 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 LAMTOR5O43504 91 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 CD160O95971 181 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 GRIA4P48058 902 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 KPNA2P52292 529 aaKnown RBP8.09□□□□□ -1.11
CHPT1-208ENST00000552215 CDKN2DP55273 166 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 NFATC2Q13469 925 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 ZRSR2Q15696 482 aaKnown RBP8.09□□□□□ -1.11
CHPT1-208ENST00000552215 VWA5B1Q5TIE3 1220 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 METTL3Q86U44 580 aaKnown RBP8.09□□□□□ -1.11
CHPT1-208ENST00000552215 CDYL2Q8N8U2 506 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 GFM2Q969S9 779 aaKnown RBP8.09□□□□□ -1.11
CHPT1-208ENST00000552215 SCRN2Q96FV2 425 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 GUCD1Q96NT3 240 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 OLFM1Q99784 485 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 SMOC1Q9H4F8 434 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 FSCN3Q9NQT6 498 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 PLEKHM1Q9Y4G2 1056 aa8.09□□□□□ -1.11
CHPT1-208ENST00000552215 TRPM6Q9BX84 2022 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 ZCWPW2A0A1B0GU75 182 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 CPED1A4D0V7 1026 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 A8MU76 341 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 ISM1B1AKI9 464 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 RASSF9O75901 435 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 MPSTP25325 297 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 TARSP26639 723 aaKnown RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 TMEM115Q12893 351 aaPredicted RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 MPP2Q14168 576 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 C9orf64Q5T6V5 341 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 ATG16L1Q676U5 607 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 TMEM92Q6UXU6 159 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 UBE2R2Q712K3 238 aaPredicted RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 ZC3HC1Q86WB0 502 aaKnown RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 CILP2Q8IUL8 1156 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 PIH1D2Q8WWB5 315 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 CCT8L2Q96SF2 557 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 SLC2A11Q9BYW1 496 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 KLHL20Q9Y2M5 609 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 NFS1Q9Y697 457 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 PRSS21Q9Y6M0 314 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 OR52A4PA6NMU1 304 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 WASH4PA8MWX3 477 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 GLRA3O75311 464 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 PEX11BO96011 259 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 MYF5P13349 255 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 COL9A1P20849 921 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 CES1P23141 567 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 BDKRB1P46663 353 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 CTSCP53634 463 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 EPHA5P54756 1037 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 NAE1Q13564 534 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 NFE2L1Q14494 772 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 EIF4HQ15056 248 aaKnown RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 RBBP5Q15291 538 aaKnown RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 CLEC6AQ6EIG7 209 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 GALNT13Q8IUC8 556 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 PHYKPLQ8IUZ5 450 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 FSTL5Q8N475 847 aaPredicted RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 TEX9Q8N6V9 391 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 OR13J1Q8NGT2 312 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 DCAKDQ8WVC6 231 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 CXorf40BQ96DE9 158 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 SLC17A9Q9BYT1 436 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 TRIM55Q9BYV6 548 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 CNOT10Q9H9A5 744 aaKnown RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 ARMCX1Q9P291 453 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 HS3ST2Q9Y278 367 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 H0Y858 1186 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 FPGTO14772 594 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 SEMA4FO95754 770 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 SLC35G4P0C7Q5 338 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 NDUFV2P19404 249 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 CXCL12P48061 93 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 SPINT3P49223 89 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 ARL4DP49703 201 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 C21orf59P57076 290 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 MEF2AQ02078 507 aaPredicted RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 MMEL1Q495T6 779 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 SH2D4BQ5SQS7 431 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 LIPIQ6XZB0 460 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 PLD3Q8IV08 490 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 MAGEB10Q96LZ2 347 aaPredicted RBP8.08□□□□□ -1.12
CHPT1-208ENST00000552215 C12orf66Q96MD2 445 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 S1PR5Q9H228 398 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 RHBGQ9H310 441 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 SYTL2Q9HCH5 934 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 GNPTGQ9UJJ9 305 aa8.08□□□□□ -1.12
CHPT1-208ENST00000552215 POM121BA6NF01 834 aa8.07□□□□□ -1.12
CHPT1-208ENST00000552215 GREM1O60565 184 aa8.07□□□□□ -1.12
CHPT1-208ENST00000552215 LATS1O95835 1130 aa8.07□□□□□ -1.12
CHPT1-208ENST00000552215 LTA4HP09960 611 aaKnown RBP8.07□□□□□ -1.12
CHPT1-208ENST00000552215 AMD1P17707 334 aa8.07□□□□□ -1.12
CHPT1-208ENST00000552215 BMP8BP34820 402 aa8.07□□□□□ -1.12
CHPT1-208ENST00000552215 LIMK2P53671 638 aa8.07□□□□□ -1.12
CHPT1-208ENST00000552215 PTSQ03393 145 aa8.07□□□□□ -1.12
CHPT1-208ENST00000552215 AGBL2Q5U5Z8 902 aa8.07□□□□□ -1.12
CHPT1-208ENST00000552215 SNX20Q7Z614 316 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms