RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 MAP9Q49MG5 647 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 ZNF574Q6ZN55 896 aaPredicted RBP16.48■□□□□ 0.23
BRF1-219ENST00000551787 DET1Q7L5Y6 550 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 PIM3Q86V86 326 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 KLHDC8BQ8IXV7 354 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 SFRP1Q8N474 314 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 FBXO39Q8N4B4 442 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 GLIS1Q8NBF1 620 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 TRIM58Q8NG06 486 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 WDR36Q8NI36 951 aaKnown RBP16.48■□□□□ 0.23
BRF1-219ENST00000551787 UBE2Q2Q8WVN8 375 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 LRRC45Q96CN5 670 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 SLC46A1Q96NT5 459 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 SLC38A3Q99624 504 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 NUDT22Q9BRQ3 303 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 STRADBQ9C0K7 418 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 ASB8Q9H765 288 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 LRRC40Q9H9A6 602 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 ETNK1Q9HBU6 452 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 ARNT2Q9HBZ2 717 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 KCNK4Q9NYG8 393 aa16.48■□□□□ 0.23
BRF1-219ENST00000551787 SCHIP1Q9P0W5 487 aaPredicted RBP16.48■□□□□ 0.23
BRF1-219ENST00000551787 CCDC187A0A096LP49 1063 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 CCDC78A2IDD5 438 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 OR2AG2A6NM03 316 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 PDZK1P1A8MUH7 402 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 LDB2O43679 373 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 SRP72O76094 671 aaKnown RBP16.47■□□□□ 0.23
BRF1-219ENST00000551787 CPNE6O95741 557 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 AP2A1O95782 977 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 FGGP02679 453 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 F3P13726 295 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 GPR3P46089 330 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 DRG2P55039 364 aaKnown RBP16.47■□□□□ 0.23
BRF1-219ENST00000551787 HHEXQ03014 270 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 CFHR1Q03591 330 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 ZFP36L1Q07352 338 aaKnown RBP16.47■□□□□ 0.23
BRF1-219ENST00000551787 ITGA9Q13797 1035 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 SEPT6Q14141 434 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 POU6F1Q14863 301 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 NR1D2Q14995 579 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 COL28A1Q2UY09 1125 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 LDLRAP1Q5SW96 308 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 TMEM220Q6QAJ8 160 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 RAB11FIP2Q7L804 512 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 LSMEM2Q8N112 164 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 BEND7Q8N7W2 519 aaPredicted RBP16.47■□□□□ 0.23
BRF1-219ENST00000551787 DTX3LQ8TDB6 740 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 RTP4Q96DX8 246 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 SGF29Q96ES7 293 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 CRELD1Q96HD1 420 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 DNAJC1Q96KC8 554 aaKnown RBP16.47■□□□□ 0.23
BRF1-219ENST00000551787 TMEM74Q96NL1 305 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 FRMD8P1Q9BZ68 369 aaPredicted RBP16.47■□□□□ 0.23
BRF1-219ENST00000551787 ASCL3Q9NQ33 180 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 CPNE7Q9UBL6 633 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 COL27A1Q8IZC6 1860 aaPredicted RBP16.47■□□□□ 0.23
BRF1-219ENST00000551787 CHD6Q8TD26 2715 aa16.47■□□□□ 0.23
BRF1-219ENST00000551787 IGHV1OR21-1A0A087WYE8 117 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 PRAMEF33A0A0G2JMD5 474 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 TMX2-CTNND1H3BSU7 103 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 PLD2O14939 933 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 POP7O75817 140 aaKnown RBP16.46■□□□□ 0.23
BRF1-219ENST00000551787 MSH3P20585 1137 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 AKT1P31749 480 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 CCKBRP32239 447 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 MAPK9P45984 424 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 FASLGP48023 281 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 LMAN1P49257 510 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 ZNF140P52738 457 aaPredicted RBP16.46■□□□□ 0.23
BRF1-219ENST00000551787 XIAPP98170 497 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 CCDC38Q502W7 563 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 FNBP1LQ5T0N5 605 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.46■□□□□ 0.23
BRF1-219ENST00000551787 C11orf96Q7Z7L8 435 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 SLITRK4Q8IW52 837 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 CCDC89Q8N998 374 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 RCBTB1Q8NDN9 531 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 DDHD1Q8NEL9 900 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 OR52K1Q8NGK4 314 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 CCDC97Q96F63 343 aaPredicted RBP16.46■□□□□ 0.23
BRF1-219ENST00000551787 LIN37Q96GY3 246 aaPredicted RBP16.46■□□□□ 0.23
BRF1-219ENST00000551787 ZNF578Q96N58 590 aaPredicted RBP16.46■□□□□ 0.23
BRF1-219ENST00000551787 ZMYND15Q9H091 742 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 SARS2Q9NP81 518 aaKnown RBP16.46■□□□□ 0.23
BRF1-219ENST00000551787 RAB6BQ9NRW1 208 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 TMEM9Q9P0T7 183 aa16.46■□□□□ 0.23
BRF1-219ENST00000551787 ZNF624Q9P2J8 865 aaPredicted RBP16.46■□□□□ 0.23
BRF1-219ENST00000551787 FEZ2Q9UHY8 353 aaPredicted RBP16.46■□□□□ 0.23
BRF1-219ENST00000551787 A0A087WV48 116 aa16.45■□□□□ 0.22
BRF1-219ENST00000551787 IGHV5-10-1A0A0J9YXX1 117 aa16.45■□□□□ 0.22
BRF1-219ENST00000551787 E7EVH7 732 aa16.45■□□□□ 0.22
BRF1-219ENST00000551787 RRP8O43159 456 aaKnown RBP16.45■□□□□ 0.22
BRF1-219ENST00000551787 PSMD3O43242 534 aa16.45■□□□□ 0.22
BRF1-219ENST00000551787 ZW10O43264 779 aa16.45■□□□□ 0.22
BRF1-219ENST00000551787 DXOO77932 396 aaKnown RBP16.45■□□□□ 0.22
BRF1-219ENST00000551787 PRSS56P0CW18 603 aa16.45■□□□□ 0.22
BRF1-219ENST00000551787 PBLDP30039 288 aaPredicted RBP16.45■□□□□ 0.22
BRF1-219ENST00000551787 CSF2RBP32927 897 aa16.45■□□□□ 0.22
BRF1-219ENST00000551787 GRIA1P42261 906 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms