RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TTLL8A6PVC2 850 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 KMOO15229 486 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 VEGFDO43915 354 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 PDGFAP04085 211 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 MMP2P08253 660 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 BRAFP15056 766 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF7P17097 686 aaPredicted RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 NELFEP18615 380 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 LEPRP48357 1165 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 SEPHS1P49903 392 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 DCDC1P59894 354 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 SPTBN1Q01082 2364 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 KLHL30Q0D2K2 578 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 MMRN1Q13201 1228 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 CCDC183Q5T5S1 534 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 CACHD1Q5VU97 1274 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 PAPD7Q5XG87 772 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 PDPK2PQ6A1A2 396 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 SASS6Q6UVJ0 657 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 TMC3Q7Z5M5 1100 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 ADGRG6Q86SQ4 1221 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 TMEM135Q86UB9 458 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 PPP1R3BQ86XI6 285 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 TNRC6AQ8NDV7 1962 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 LPCAT1Q8NF37 534 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 GLYATL1Q969I3 302 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 HS3ST6Q96QI5 342 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 TIMM29Q9BSF4 260 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 ZSCAN5AQ9BUG6 496 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 XPO4Q9C0E2 1151 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 TWSG1Q9GZX9 223 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 BRD8Q9H0E9 1235 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 OR2AG1Q9H205 316 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 ZFYVE1Q9HBF4 777 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 MAGEE1Q9HCI5 957 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 LHX9Q9NQ69 397 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 RAD18Q9NS91 495 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 POT1Q9NUX5 634 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 CUEDC1Q9NWM3 386 aaPredicted RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 NFKBIL1Q9UBC1 381 aaPredicted RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 MAP4K5Q9Y4K4 846 aa9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 PCDHGA9Q9Y5G4 932 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 SPENQ96T58 3664 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-207ENST00000550051 MED13Q9UHV7 2174 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 ESPL1Q14674 2120 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 CDC14CA4D256 554 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 KIF1CO43896 1103 aaKnown RBP9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 MFSD11O43934 449 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 KCNJ13O60928 360 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 RASSF9O75901 435 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 AGFG2O95081 481 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 HLA-DQB2P05538 268 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 CD48P09326 243 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 MX2P20592 715 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 GNLYP22749 145 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 PTPN4P29074 926 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 LAMB3Q13751 1172 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 DPYSL3Q14195 570 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 KRT81Q14533 505 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 HADHQ16836 314 aaKnown RBP9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 UGT8Q16880 541 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF648Q5T619 568 aaPredicted RBP9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 E4F1Q66K89 784 aaPredicted RBP9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 NCBP2-AS2Q69YL0 99 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 LRRTM4Q86VH4 590 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF547Q8IVP9 402 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 TRIM48Q8IWZ4 208 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 TRAM1L1Q8N609 369 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 GPR26Q8NDV2 337 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 CPT1CQ8TCG5 803 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 SSC4DQ8WTU2 575 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 CT55Q8WUE5 264 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 UBXN4Q92575 508 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 SLC41A2Q96JW4 573 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 SPATA16Q9BXB7 569 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 OSGEPL1Q9H4B0 414 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 ACTL8Q9H568 366 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 PDE7BQ9NP56 450 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 DTLQ9NZJ0 730 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 SPTAN1Q13813 2472 aaKnown RBP9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 SHANK1Q9Y566 2161 aa9.68□□□□□ -0.86
TRAFD1-207ENST00000550051 CACNA1DQ01668 2161 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 MYO1FO00160 1098 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 MTA2O94776 668 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 TIAF1O95411 115 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 CYP1A2P05177 515 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 SKILP12757 684 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 LPOP22079 712 aaPredicted RBP9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 IDSP22304 550 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 CASP14P31944 242 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 CAPZBP47756 277 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 UQCRFS1P47985 274 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 PGDP52209 483 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 SLC10A2Q12908 348 aaPredicted RBP9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 GPR18Q14330 331 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 PDK2Q15119 407 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 STX1AQ16623 288 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 INSCQ1MX18 579 aa9.67□□□□□ -0.86
TRAFD1-207ENST00000550051 ATP13A4Q4VNC1 1196 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms