RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 CFAP58Q5T655 872 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 CACHD1Q5VU97 1274 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 SLC9B2Q86UD5 537 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 FAM131BQ86XD5 332 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 PHF13Q86YI8 300 aaPredicted RBP8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 RAB43Q86YS6 212 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 PHC2Q8IXK0 858 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 PELI3Q8N2H9 469 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 PPP4R1Q8TF05 950 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 COG1Q8WTW3 980 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 ARHGEF2Q92974 986 aaKnown RBP8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 PGAP3Q96FM1 320 aaPredicted RBP8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 MAGEB10Q96LZ2 347 aaPredicted RBP8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 GDAP1L1Q96MZ0 367 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 NCAPGQ9BPX3 1015 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 ZNF559Q9BR84 538 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 MLPHQ9BV36 600 aaPredicted RBP8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 NLNQ9BYT8 704 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 FRMD8Q9BZ67 464 aaPredicted RBP8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 TTYH3Q9C0H2 523 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 CNOT8Q9UFF9 292 aaKnown RBP8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 TMEM59LQ9UK28 342 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 ADAM21Q9UKJ8 722 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 HPCAL4Q9UM19 191 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 MYO6Q9UM54 1294 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 SNX10Q9Y5X0 201 aa8.16□□□□□ -1.1
SMARCD1-207ENST00000549526 CNTRLQ7Z7A1 2325 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 CCDC88CQ9P219 2028 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 C2CD4BA6NLJ0 364 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 A8MX80 341 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 TMCO5BA8MYB1 307 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 PEX12O00623 359 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 CPNE3O75131 537 aaKnown RBP8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 SCRG1O75711 98 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 PIGNO95427 931 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 LY6G6DO95868 133 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 RAB40ALP0C0E4 278 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 ELFN1P0C7U0 828 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 KRT3P12035 628 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 FOLR1P15328 257 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 NELFEP18615 380 aaKnown RBP8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 GPD1P21695 349 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 MMP12P39900 470 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 RBPJQ06330 500 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 KLHL30Q0D2K2 578 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 PTP4A2Q12974 167 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 GPS2Q13227 327 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 KCNAB1Q14722 419 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 PRKD1Q15139 912 aaPredicted RBP8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 TLR1Q15399 786 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 C15orf59Q2T9L4 293 aaPredicted RBP8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 CES4AQ5XG92 561 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 B3GNTL1Q67FW5 361 aaPredicted RBP8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 ACAD10Q6JQN1 1059 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 LCN10Q6JVE6 187 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 DNAJC24Q6P3W2 148 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 IYDQ6PHW0 289 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 DOK6Q6PKX4 331 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 MON1BQ7L1V2 547 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 ARCQ7LC44 396 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 IRF2BP2Q7Z5L9 587 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 BPHLQ86WA6 291 aaPredicted RBP8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 TMEM126BQ8IUX1 230 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 DRC7Q8IY82 874 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 SIDT2Q8NBJ9 832 aaKnown RBP8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 C3orf20Q8ND61 904 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 JOSD2Q8TAC2 188 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 RXFP2Q8WXD0 754 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 KLHL6Q8WZ60 621 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 NT5C3BQ969T7 300 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 GBP5Q96PP8 586 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 OR2M4Q96R27 311 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 TREX2Q9BQ50 279 aaPredicted RBP8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 TEX101Q9BY14 249 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 HAUS4Q9H6D7 363 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 GPAMQ9HCL2 828 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 ANLNQ9NQW6 1124 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 TMEM51Q9NW97 253 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 ST6GALNAC2Q9UJ37 374 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 SLC17A4Q9Y2C5 497 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 ATP8A1Q9Y2Q0 1164 aa8.15□□□□□ -1.1
SMARCD1-207ENST00000549526 AKAP6Q13023 2319 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 CCDC78A2IDD5 438 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 CFAP69A5D8W1 941 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 ANKRD62A6NC57 917 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 GOLGA6CA6NDK9 693 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 GOLGA6BA6NDN3 693 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 I6L893 689 aaPredicted RBP8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 UBXN7O94888 489 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 IGSF6O95976 241 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 IGHEP01854 428 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 IVLP07476 585 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 GOLGA6DP0CG33 693 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 SKILP12757 684 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 DNASE1P24855 282 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 RFC1P35251 1148 aaPredicted RBP8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 ACVRL1P37023 503 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 TDGF1P3P51864 188 aa8.14□□□□□ -1.11
SMARCD1-207ENST00000549526 DGKQP52824 942 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms