RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	MACC1	Q6ZN28	852 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	TRIM74	Q86UV6	250 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	CLDN19	Q8N6F1	224 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	BIRC7	Q96CA5	298 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	TSPAN17	Q96FV3	270 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	SERAC1	Q96JX3	654 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	MYOC	Q99972	504 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	CAB39L	Q9H9S4	337 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	EBF2	Q9HAK2	575 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	PHPT1	Q9NRX4	125 aa	Predicted RBP	12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	SENP1	Q9P0U3	644 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	GNPTG	Q9UJJ9	305 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	FBXO4	Q9UKT5	387 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	NOVA2	Q9UNW9	492 aa	Known RBP	12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	OAS3	Q9Y6K5	1087 aa	Known RBP	12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	PRSS21	Q9Y6M0	314 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	GPR179	Q6PRD1	2367 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	MUC6	Q6W4X9	2439 aa		12.09	□□□□□ -0.47
ERBB3-208	ENST00000549205	METTL12	A8MUP2	240 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	PRAMEF26	H0Y7S4	382 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205		H3BQF6	201 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	MAP3K13	O43283	966 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	VEGFD	O43915	354 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	MTX2	O75431	263 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	AP2A2	O94973	939 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	HOXC4	P09017	264 aa	Predicted RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	MYCLP1	P12525	358 aa	Predicted RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	STMN1	P16949	149 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	SAT1	P21673	171 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	CD9	P21926	228 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	BCKDHB	P21953	392 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	FDXR	P22570	491 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	CRABP2	P29373	138 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	TYK2	P29597	1187 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	CSRP3	P50461	194 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	SLC12A2	P55011	1212 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	TAS2R39	P59534	338 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	RAB10	P61026	200 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	RPL6	Q02878	288 aa	Known RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	CSTF1	Q05048	431 aa	Known RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	TMEM115	Q12893	351 aa	Predicted RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	ZKSCAN8	Q15776	578 aa	Predicted RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	ZNF648	Q5T619	568 aa	Predicted RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	KCTD16	Q68DU8	428 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	PTRHD1	Q6GMV3	140 aa	Known RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	KDM7A	Q6ZMT4	941 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	CMC1	Q7Z7K0	106 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	EXOC3L1	Q86VI1	746 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	CEP97	Q8IW35	865 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	SRRM1	Q8IYB3	904 aa	Known RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	TMEM145	Q8NBT3	493 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	ACMSD	Q8TDX5	336 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	FUBP1	Q96AE4	644 aa	Known RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	OLFM1	Q99784	485 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	APOO	Q9BUR5	198 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	FAM126A	Q9BYI3	521 aa	Predicted RBP	12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	OR2AG1	Q9H205	316 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	EPHX3	Q9H6B9	360 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	TRIM39	Q9HCM9	518 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	SNX15	Q9NRS6	342 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	TAS2R13	Q9NYV9	303 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	MED16	Q9Y2X0	877 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	VWA7	Q9Y334	891 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	OR1A2	Q9Y585	309 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	ACTL7B	Q9Y614	415 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	HS3ST3A1	Q9Y663	406 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205	RALGAPA1	Q6GYQ0	2036 aa		12.08	□□□□□ -0.48
ERBB3-208	ENST00000549205		A0A1W2PPC4	97 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	POM121B	A6NF01	834 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205		F8W8V4	182 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	QSOX1	O00391	747 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	SGTA	O43765	313 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	NIPSNAP2	O75323	286 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	VPS26A	O75436	327 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	RHOBTB1	O94844	696 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	MPO	P05164	745 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	OR56A5	P0C7T3	313 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	PYGB	P11216	843 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	KRT4	P19013	534 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	CD27	P26842	260 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	CCNF	P41002	786 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	CLDN2	P57739	230 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	KIAA1024L	P59773	190 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	MAGOH	P61326	146 aa	Known RBP	12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	GCNT7	Q6ZNI0	430 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	SH2D5	Q6ZV89	423 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	DET1	Q7L5Y6	550 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	CCDC91	Q7Z6B0	441 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	ADGRG6	Q86SQ4	1221 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	PIM3	Q86V86	326 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	LONP2	Q86WA8	852 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	RASGEF1A	Q8N9B8	481 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	NAT14	Q8WUY8	206 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	SNX19	Q92543	992 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	KCNJ9	Q92806	393 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	FOXJ1	Q92949	421 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	SGF29	Q96ES7	293 aa		12.07	□□□□□ -0.48
ERBB3-208	ENST00000549205	CABS1	Q96KC9	395 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms