RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 ADPGKQ9BRR6 497 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 TRIM2Q9C040 744 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 PRSS22Q9GZN4 317 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 PDZD7Q9H5P4 517 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 GAREM1Q9H706 876 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 TRPV4Q9HBA0 871 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 POLD4Q9HCU8 107 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 DUS2Q9NX74 493 aaKnown RBP4.41□□□□□ -1.7
CBX5-203ENST00000547872 BARHL2Q9NY43 387 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 VPS54Q9P1Q0 977 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 SEMA5BQ9P283 1151 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 PILRBQ9UKJ0 227 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 NFU1Q9UMS0 254 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 FREM2Q5SZK8 3169 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 DMXL2Q8TDJ6 3036 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 DSPP15924 2871 aaKnown RBP4.41□□□□□ -1.7
CBX5-203ENST00000547872 LAMA5O15230 3695 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 IGSF10Q6WRI0 2623 aa4.41□□□□□ -1.7
CBX5-203ENST00000547872 GXYLT2A0PJZ3 443 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 LGALS16A8MUM7 142 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 FCHO1O14526 889 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 PRYO14603 147 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 TRDMT1O14717 391 aaKnown RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 SLC37A4O43826 429 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 USP12O75317 370 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 TNFRSF6BO95407 300 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 CER1O95813 267 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 EDN1P05305 212 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 CYP3A4P08684 503 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 GLRA2P23416 452 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 ATP5F1P24539 256 aaPredicted RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 ADSSP30520 456 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 HSPA4P34932 840 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 THBS4P35443 961 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 P2RY2P41231 377 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 MMP13P45452 471 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 QARSP47897 775 aaKnown RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 NT5C2P49902 561 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 PTENP60484 403 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 YPEL5P62699 121 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 YWHAHQ04917 246 aaPredicted RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 GAB1Q13480 694 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 PRPF4BQ13523 1007 aaKnown RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 HNRNPDQ14103 355 aaKnown RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 PTK2BQ14289 1009 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 VEPH1Q14D04 833 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 DAZAP2Q15038 168 aaPredicted RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 UPP1Q16831 310 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 PFKFB4Q16877 469 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 ZACNQ401N2 412 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 FBXO43Q4G163 708 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 GLE1Q53GS7 698 aaKnown RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 TXNDC8Q6A555 127 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 ANKRD40Q6AI12 368 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 SLC8B1Q6J4K2 584 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 C16orf89Q6UX73 402 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 KIAA1324Q6UXG2 1013 aaKnown RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 CD300LGQ6UXG3 332 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 KYAT3Q6YP21 454 aaKnown RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 DNAJB7Q7Z6W7 309 aaPredicted RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 TRABD2AQ86V40 505 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 ZBTB8OSQ8IWT0 167 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 EFCAB13Q8IY85 973 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 GALNT15Q8N3T1 639 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 ATG16L2Q8NAA4 619 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 LEMD2Q8NC56 503 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 TBCKQ8TEA7 893 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 DENND1AQ8TEH3 1009 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 USP13Q92995 863 aaPredicted RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 REXO5Q96IC2 774 aaKnown RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 GPR88Q9GZN0 384 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 TP63Q9H3D4 680 aaPredicted RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 CCDC134Q9H6E4 229 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 TASP1Q9H6P5 420 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 ECT2Q9H8V3 914 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 C6orf50Q9HD87 102 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 KCNK9Q9NPC2 374 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 XPNPEP1Q9NQW7 623 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 LRFN1Q9P244 771 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 ANKMY1Q9P2S6 941 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 TUBGCP4Q9UGJ1 667 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 DDX25Q9UHL0 483 aaKnown RBP4.4□□□□□ -1.71
CBX5-203ENST00000547872 MMP17Q9ULZ9 603 aa4.4□□□□□ -1.71
CBX5-203ENST00000547872 PTPRDP23468 1912 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 KLF18A0A0U1RQI7 1052 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 MTMR11A4FU01 709 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 M0QZQ0 153 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 HIP1O00291 1037 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 SYT5O00445 386 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 ZBTB43O43298 467 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 PSMD10O75832 226 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 VNN2O95498 520 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 ITGA2BP08514 1039 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 CD63P08962 238 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 GNSP15586 552 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 HOXD12P35452 270 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 TNFSF9P41273 254 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 MATKP42679 507 aa4.39□□□□□ -1.71
CBX5-203ENST00000547872 MATR3P43243 847 aaKnown RBP eCLIP4.39□□□□□ -1.71
CBX5-203ENST00000547872 AGTR2P50052 363 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms