RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 PPP2CBP62714 309 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 PPP2CAP67775 309 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 SERINC3Q13530 473 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 USP10Q14694 798 aaKnown RBP17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 WLSQ5T9L3 541 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 KIAA0895LQ68EN5 471 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 C10orf107Q8IVU9 208 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 KIF2BQ8N4N8 673 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 GANCQ8TET4 914 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 PDCD6IPQ8WUM4 868 aaKnown RBP17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 ARRDC3Q96B67 414 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 TSPAN17Q96FV3 270 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 OMDQ99983 421 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 SUSD2Q9UGT4 822 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 NCKAP1Q9Y2A7 1128 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 WASF2Q9Y6W5 498 aa17.16■□□□□ 0.34
RBFOX1-207ENST00000547338 CEP295Q9C0D2 2601 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 CXorf51AA0A1B0GTR3 108 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 LOC285095A0A1B0GVY8 99 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 AHSGP02765 367 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 CD151P48509 253 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 RAB10P61026 200 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 GRIK2Q13002 908 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 RFTN1Q14699 578 aaPredicted RBP17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 PPM1JQ5JR12 505 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 PIP5KL1Q5T9C9 394 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 IL31Q6EBC2 164 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 ALG1LQ6GMV1 187 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 LAYNQ6UX15 382 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 MINDY1Q8N5J2 469 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 OR2T34Q8NGX1 318 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 SNX19Q92543 992 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 HMCESQ96FZ2 354 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 TM9SF3Q9HD45 589 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 MRGBPQ9NV56 204 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 OXSMQ9NWU1 459 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 SLC17A6Q9P2U8 582 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 TAGLN3Q9UI15 199 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 CORO1CQ9ULV4 474 aaPredicted RBP17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 DNAJC16Q9Y2G8 782 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 STK38LQ9Y2H1 464 aa17.15■□□□□ 0.34
RBFOX1-207ENST00000547338 G3V2L1 256 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 WNT9AO14904 365 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 GYG2O15488 501 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 PRAMEF11O60813 436 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 PMPCBO75439 489 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 VAPBO95292 243 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 CBX6O95503 412 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 STMN1P16949 149 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 HLA-DPA1P20036 260 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 KCNA4P22459 653 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 CD27P26842 260 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 GRM3Q14832 879 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 POU6F1Q14863 301 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 TSTD2Q5T7W7 516 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 RETSATQ6NUM9 610 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 NEPROQ6NW34 567 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 ZYG11AQ6WRX3 759 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 RAPH1Q70E73 1250 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 TMIEQ8NEW7 156 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 OR14C36Q8NHC7 312 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 CCDC126Q96EE4 140 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 FEM1CQ96JP0 617 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 RILPQ96NA2 401 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 GTPBP2Q9BX10 602 aaKnown RBP17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 CEP44Q9C0F1 390 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 POLR1EQ9GZS1 481 aaKnown RBP17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 NT5MQ9NPB1 228 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 ARL8BQ9NVJ2 186 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 SLC39A10Q9ULF5 831 aa17.14■□□□□ 0.33
RBFOX1-207ENST00000547338 GIPC1O14908 333 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 HGSO14964 777 aaPredicted RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 GSC2O15499 205 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 LATO43561 262 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 PLRG1O43660 514 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 KDELR3O43731 214 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 MAGEC1O60732 1142 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 GNSP15586 552 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 LEPRP48357 1165 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 CSNK1EP49674 416 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 LBRQ14739 615 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 DNAL1Q4LDG9 190 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 LIPMQ5VYY2 423 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 ESRP1Q6NXG1 681 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 CMC1Q7Z7K0 106 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 DSG4Q86SJ6 1040 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 PIP4P1Q86T03 277 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 PCDH20Q8N6Y1 951 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 GRIN3AQ8TCU5 1115 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 UTP4Q969X6 686 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 CCDC106Q9BWC9 280 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 ILKAPQ9H0C8 392 aaPredicted RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 IL21RQ9HBE5 538 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 DNAAF2Q9NVR5 837 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 VTI1BQ9UEU0 232 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 FBXO5Q9UKT4 447 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 TRIM33Q9UPN9 1127 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms