RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 MICALCLQ6ZW33 695 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 ZNF572Q7Z3I7 529 aaPredicted RBP16.6■□□□□ 0.25
LTBR-215ENST00000546296 MPP5Q8N3R9 675 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 ARL10Q8N8L6 244 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 MNS1Q8NEH6 495 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 OR4L1Q8NH43 312 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 ZDHHC1Q8WTX9 485 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 SNF8Q96H20 258 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 ZNF514Q96K75 400 aaPredicted RBP16.6■□□□□ 0.25
LTBR-215ENST00000546296 MRM3Q9HC36 420 aaKnown RBP16.6■□□□□ 0.25
LTBR-215ENST00000546296 KLC4Q9NSK0 619 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 ZDHHC3Q9NYG2 299 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 SOX13Q9UN79 622 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 KCNK6Q9Y257 313 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 SNX24Q9Y343 169 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 MAD1L1Q9Y6D9 718 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 TDRD6O60522 2096 aaKnown RBP16.6■□□□□ 0.25
LTBR-215ENST00000546296 OR2AG2A6NM03 316 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 AGAP14A8MT82 685 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 NDC80O14777 642 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 RAD51CO43502 376 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 SNX2O60749 519 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 PRSS56P0CW18 603 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 ZNF7P17097 686 aaPredicted RBP16.59■□□□□ 0.25
LTBR-215ENST00000546296 VCLP18206 1134 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 ACRV1P26436 265 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 ACVR1Q04771 509 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 BIRC2Q13490 618 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 MORF4L2Q15014 288 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 DNAJC21Q5F1R6 531 aaKnown RBP16.59■□□□□ 0.25
LTBR-215ENST00000546296 FNBP1LQ5T0N5 605 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 LYPLAL1Q5VWZ2 237 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 ARMC3Q5W041 872 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 SLCO6A1Q86UG4 719 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 SLC35F3Q8IY50 421 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 PIANPQ8IYJ0 282 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 PNPLA1Q8N8W4 532 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 KYQ8NBH2 561 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 BBOF1Q8ND07 529 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 SGF29Q96ES7 293 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 ERP44Q9BS26 406 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 OSGEPL1Q9H4B0 414 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 PADI4Q9UM07 663 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 DNAJC16Q9Y2G8 782 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 ST14Q9Y5Y6 855 aa16.59■□□□□ 0.25
LTBR-215ENST00000546296 DNAH14Q0VDD8 3507 aa16.58■□□□□ 0.25
LTBR-215ENST00000546296 TRBV5-4A0A0C4DH59 114 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 SMAPO00193 183 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 POP7O75817 140 aaKnown RBP16.58■□□□□ 0.24
LTBR-215ENST00000546296 ATP1B2P14415 290 aaPredicted RBP16.58■□□□□ 0.24
LTBR-215ENST00000546296 PAMP19021 973 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 ACP1P24666 158 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 PPARGP37231 505 aaPredicted RBP16.58■□□□□ 0.24
LTBR-215ENST00000546296 ACADVLP49748 655 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 CTSCP53634 463 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 ITGA8P53708 1063 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 DBN1Q16643 649 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 OGFOD3Q6PK18 319 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 EFL1Q7Z2Z2 1120 aaKnown RBP16.58■□□□□ 0.24
LTBR-215ENST00000546296 ZNF547Q8IVP9 402 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 OTUD6BQ8N6M0 293 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 MFSD3Q96ES6 412 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 TIMM29Q9BSF4 260 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 DPH5Q9H2P9 285 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 TREX1Q9NSU2 369 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 CATSPERZQ9NTU4 200 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 SLC23A2Q9UGH3 650 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 UTP11Q9Y3A2 253 aaKnown RBP16.58■□□□□ 0.24
LTBR-215ENST00000546296 MRFAP1Q9Y605 127 aa16.58■□□□□ 0.24
LTBR-215ENST00000546296 SCN8AQ9UQD0 1980 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 TRBV23OR9-2A0A075B6M9 112 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 LY6G6EA0A0G2JKS1 128 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 CD3EAPO15446 510 aaKnown RBP16.57■□□□□ 0.24
LTBR-215ENST00000546296 RFPL3O75679 317 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 SEC31AO94979 1220 aaKnown RBP16.57■□□□□ 0.24
LTBR-215ENST00000546296 VAPBO95292 243 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 PBLDP30039 288 aaPredicted RBP16.57■□□□□ 0.24
LTBR-215ENST00000546296 FOXN2P32314 431 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 RPL21P46778 160 aaKnown RBP16.57■□□□□ 0.24
LTBR-215ENST00000546296 CALCOCO2Q13137 446 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 ILKQ13418 452 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 BBS9Q3SYG4 887 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 ANKRD20A4Q4UJ75 823 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 AARS2Q5JTZ9 985 aaKnown RBP16.57■□□□□ 0.24
LTBR-215ENST00000546296 HIBCHQ6NVY1 386 aaPredicted RBP16.57■□□□□ 0.24
LTBR-215ENST00000546296 GUSBP11Q6P575 273 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 CERS6Q6ZMG9 384 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 ERMP1Q7Z2K6 904 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 AMZ2Q86W34 360 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 PDIK1LQ8N165 341 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 IFI44Q8TCB0 444 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 NAT14Q8WUY8 206 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 ZNF669Q96BR6 464 aaPredicted RBP16.57■□□□□ 0.24
LTBR-215ENST00000546296 STAMBPL1Q96FJ0 436 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 RAB17Q9H0T7 212 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 ABCG4Q9H172 646 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 TOR4AQ9NXH8 423 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 TBC1D29Q9UFV1 150 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 PCDHGA1Q9Y5H4 931 aa16.57■□□□□ 0.24
LTBR-215ENST00000546296 DNMT3AQ9Y6K1 912 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms