RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RASGEF1AQ8N9B8 481 aa20.22■□□□□ 0.83
HMGA2-211ENST00000545998 OR4C6Q8NH72 309 aa20.22■□□□□ 0.83
HMGA2-211ENST00000545998 BAHD1Q8TBE0 780 aaPredicted RBP20.22■□□□□ 0.83
HMGA2-211ENST00000545998 CCDC97Q96F63 343 aaPredicted RBP20.22■□□□□ 0.83
HMGA2-211ENST00000545998 STAMBPL1Q96FJ0 436 aa20.22■□□□□ 0.83
HMGA2-211ENST00000545998 TTC25Q96NG3 672 aa20.22■□□□□ 0.83
HMGA2-211ENST00000545998 FCRL3Q96P31 734 aaPredicted RBP20.22■□□□□ 0.83
HMGA2-211ENST00000545998 COPS8Q99627 209 aa20.22■□□□□ 0.83
HMGA2-211ENST00000545998 EBNA1BP2Q99848 306 aaKnown RBP20.22■□□□□ 0.83
HMGA2-211ENST00000545998 ZDHHC3Q9NYG2 299 aa20.22■□□□□ 0.83
HMGA2-211ENST00000545998 PLEKHM1Q9Y4G2 1056 aa20.22■□□□□ 0.83
HMGA2-211ENST00000545998 BHMG1C9JSJ3 638 aaPredicted RBP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 TPP1O14773 563 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 USP1O94782 785 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 MSH3P20585 1137 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 CSRP1P21291 193 aaKnown RBP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 AKT1P31749 480 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 ARCN1P48444 511 aaKnown RBP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 ARL4CP56559 192 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 CTBSQ01459 385 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 CBLBQ13191 982 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 GTF2H3Q13889 308 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 DBN1Q16643 649 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 DEFB133Q30KQ1 61 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 GLE1Q53GS7 698 aaKnown RBP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 KIAA0930Q6ICG6 404 aaPredicted RBP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 GKN2Q86XP6 184 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 ART4Q93070 314 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 RPS6KL1Q9Y6S9 549 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 ZCWPW2A0A1B0GU75 182 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 VAPBO95292 243 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 ALPPL2P10696 532 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 ILF3Q12906 894 aaKnown RBP eCLIP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 LRP8Q14114 963 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 DNTTIP2Q5QJE6 756 aaKnown RBP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 LVRNQ6Q4G3 990 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 TAF8Q7Z7C8 310 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 LRRTM4Q86VH4 590 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 IGDCC3Q8IVU1 814 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 DEFB124Q8NES8 71 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 HEXDCQ8WVB3 486 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 ZNF669Q96BR6 464 aaPredicted RBP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 LRRC39Q96DD0 335 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 WDR83Q9BRX9 315 aaKnown RBP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 NAT9Q9BTE0 207 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 DUSP23Q9BVJ7 150 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 GSDMCQ9BYG8 508 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 CATSPERZQ9NTU4 200 aa20.21■□□□□ 0.83
HMGA2-211ENST00000545998 DMGDHQ9UI17 866 aaKnown RBP20.21■□□□□ 0.83
HMGA2-211ENST00000545998 ESYT3A0FGR9 886 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 E7ESA3 106 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 KMOO15229 486 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 SIGLEC6O43699 453 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 ANXA6P08133 673 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 PGAM1P18669 254 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 PAMP19021 973 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 AK4P27144 223 aaPredicted RBP20.2■□□□□ 0.82
HMGA2-211ENST00000545998 CTSCP53634 463 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 GUCY2DQ02846 1103 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 CAV1Q03135 178 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 SEMA3AQ14563 771 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 FASTKD1Q53R41 847 aaKnown RBP20.2■□□□□ 0.82
HMGA2-211ENST00000545998 LYPLAL1Q5VWZ2 237 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 CRTC3Q6UUV7 619 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 ZDHHC24Q6UX98 284 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 CHST15Q7LFX5 561 aaPredicted RBP20.2■□□□□ 0.82
HMGA2-211ENST00000545998 C11orf96Q7Z7L8 435 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 TRAPPC5Q8IUR0 188 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 PNPLA1Q8N8W4 532 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 DCUN1D1Q96GG9 259 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 BOCQ9BWV1 1114 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 MARCH4Q9P2E8 410 aaPredicted RBP20.2■□□□□ 0.82
HMGA2-211ENST00000545998 GPR34Q9UPC5 381 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 DOLKQ9UPQ8 538 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 TEX264Q9Y6I9 313 aa20.2■□□□□ 0.82
HMGA2-211ENST00000545998 CD3EAPO15446 510 aaKnown RBP20.19■□□□□ 0.82
HMGA2-211ENST00000545998 SGTAO43765 313 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 POLBP06746 335 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 RALBP11234 206 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 ATP1B2P14415 290 aaPredicted RBP20.19■□□□□ 0.82
HMGA2-211ENST00000545998 ELK3P41970 407 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 PLTPP55058 493 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 ITIH4Q14624 930 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 TMEM220Q6QAJ8 160 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 CERS6Q6ZMG9 384 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 DET1Q7L5Y6 550 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 FAM181AQ8N9Y4 354 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 FBXO25Q8TCJ0 367 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 NAT14Q8WUY8 206 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 SGF29Q96ES7 293 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 ZNF514Q96K75 400 aaPredicted RBP20.19■□□□□ 0.82
HMGA2-211ENST00000545998 CDC6Q99741 560 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 SLC32A1Q9H598 525 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 SLC23A2Q9UGH3 650 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 FAM169AQ9Y6X4 670 aa20.19■□□□□ 0.82
HMGA2-211ENST00000545998 OR2AG2A6NM03 316 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 CFAP99D6REC4 459 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 TTC4O95801 387 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 ACP5P13686 325 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms