RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SOCS2O14508 198 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ARPC2O15144 300 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 KLK8O60259 260 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TIPRLO75663 272 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SOAT2O75908 522 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 BEST1O76090 585 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 GLP2RO95838 553 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ALBP02768 609 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 JUNP05412 331 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 THP07101 528 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 HNRNPCP07910 306 aaKnown RBP eCLIP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SPATA31D3P0C874 917 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 MBL2P11226 248 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 HNRNPLP14866 589 aaKnown RBP eCLIP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 CD1DP15813 335 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TYMPP19971 482 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TCN1P20061 433 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 MSH3P20585 1137 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ATP6V1B2P21281 511 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SAT1P21673 171 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SLC6A2P23975 617 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 HSD3B2P26439 372 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 GSTM2P28161 218 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PCSK6P29122 969 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 HOXC8P31273 242 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 AVPR1AP37288 418 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PBX3P40426 434 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 NDUFV1P49821 464 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 CPT1AP50416 773 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 HNRNPFP52597 415 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 GTF2A2P52657 109 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 MLLT6P55198 1093 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 C21orf59P57076 290 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PRAMEP78395 509 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ADARB1P78563 741 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PLOD1Q02809 727 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 MAD2L1Q13257 205 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 CTBP1Q13363 440 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 GRB14Q14449 540 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TYSND1Q2T9J0 566 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PARP15Q460N3 678 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SLC44A4Q53GD3 710 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ZC3H12BQ5HYM0 836 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SNAP47Q5SQN1 464 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 MARC1Q5VT66 337 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ANKS6Q68DC2 871 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 NIPAL1Q6NVV3 410 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 FAM117BQ6P1L5 589 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TTC23LQ6PF05 361 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SPATA31D4Q6ZUB0 917 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ANKS3Q6ZW76 656 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 OTOP3Q7RTS5 596 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PHYKPLQ8IUZ5 450 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 FUNDC1Q8IVP5 155 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 MFSD6LQ8IWD5 586 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 DDIASQ8IXT1 998 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 FAM9CQ8IZT9 166 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 THEM5Q8N1Q8 247 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 MYO1HQ8N1T3 1032 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF786Q8N393 782 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 RNF148Q8N7C7 305 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SNX31Q8N9S9 440 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ZBTB8BQ8NAP8 495 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 RNF169Q8NCN4 708 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SMG8Q8ND04 991 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ACVR1CQ8NER5 493 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ZMIZ2Q8NF64 920 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 OR8J3Q8NGG0 315 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 OR13F1Q8NGS4 319 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TWIST2Q8WVJ9 160 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 S100ZQ8WXG8 99 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 HDAC2Q92769 488 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 NKD1Q969G9 470 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 HDAC10Q969S8 669 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TMEM125Q96AQ2 219 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TBC1D20Q96BZ9 403 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 C12orf43Q96C57 262 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SDCCAG3Q96C92 435 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PCED1BQ96HM7 432 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SHDQ96IW2 340 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 MARK4Q96L34 752 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 CEP295NLQ96MC4 621 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TMEM209Q96SK2 561 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PPP1R16BQ96T49 567 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 KCTD14Q9BQ13 255 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 APOL2Q9BQE5 337 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 NPLQ9BXD5 320 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 UGT2B28Q9BY64 529 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PBX4Q9BYU1 374 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 UNKQ9C0B0 810 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 WDR12Q9GZL7 423 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 PCDHAC1Q9H158 963 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 RPF2Q9H7B2 306 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 OLA1Q9NTK5 396 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 AIG1Q9NVV5 245 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TMEM248Q9NWD8 314 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SMOXQ9NWM0 555 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 COMMD8Q9NX08 183 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 USE1Q9NZ43 259 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 COX16Q9P0S2 106 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms