RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GPR180Q86V85 440 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 TMEM199Q8N511 208 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 DHRSXQ8N5I4 330 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 LPCAT1Q8NF37 534 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 PROKR1Q8TCW9 393 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 SEPT8Q92599 483 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 PLEKHG4BQ96PX9 1271 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 CHID1Q9BWS9 393 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 POLR1BQ9H9Y6 1135 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 CD274Q9NZQ7 290 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 SCN10AQ9Y5Y9 1956 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 PATJQ8NI35 1801 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 PRLP01236 227 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 EPOP01588 193 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 RPS9P46781 194 aaKnown RBP15.65■□□□□ 0.1
LDLR-204ENST00000545707 DGKQP52824 942 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 MTPNP58546 118 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 NEDD8Q15843 81 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 XKR7Q5GH72 579 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 FAM171A1Q5VUB5 890 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 OGFOD2Q6N063 350 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 RSPO2Q6UXX9 243 aaPredicted RBP15.65■□□□□ 0.1
LDLR-204ENST00000545707 Q6ZSR9 355 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 LYSMD3Q7Z3D4 306 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 SPATA19Q7Z5L4 167 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 LINGO1Q96FE5 620 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 INTS10Q9NVR2 710 aaKnown RBP15.65■□□□□ 0.1
LDLR-204ENST00000545707 SMPD3Q9NY59 655 aaPredicted RBP15.65■□□□□ 0.1
LDLR-204ENST00000545707 HCSTQ9UBK5 93 aa15.65■□□□□ 0.1
LDLR-204ENST00000545707 TLR5O60602 858 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 KATNA1O75449 491 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 EEDO75530 441 aaKnown RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 UROSP10746 265 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 HUNKP57058 714 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 YBEYP58557 167 aaPredicted RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 ERVPABLB-1P60509 514 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 TMEM26Q6ZUK4 368 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 SNRNP27Q8WVK2 155 aaKnown RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 TRIB2Q92519 343 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 CCDC97Q96F63 343 aaPredicted RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 FUBP3Q96I24 572 aaKnown RBP eCLIP15.64■□□□□ 0.09
LDLR-204ENST00000545707 ARHGAP39Q9C0H5 1083 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 TLR8Q9NR97 1041 aaKnown RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 FAF1Q9UNN5 650 aaPredicted RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 ZFP37Q9Y6Q3 630 aaPredicted RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 GIPC1O14908 333 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 CHEK2O96017 543 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 LDLRP01130 860 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 HOXB8P17481 243 aaPredicted RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 MC4RP32245 332 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 CAPGP40121 348 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 RAB39AQ14964 217 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 C16orf72Q14CZ0 275 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 ANKDD1AQ495B1 522 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 ZRANB3Q5FWF4 1079 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 CTSL3PQ5NE16 218 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 LETMD1Q6P1Q0 360 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 GPRIN3Q6ZVF9 776 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 PTRH1Q86Y79 214 aaKnown RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 GPSM1Q86YR5 675 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 COLGALT2Q8IYK4 626 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 TNIP2Q8NFZ5 429 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 PEX13Q92968 403 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 CINPQ9BW66 212 aaPredicted RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 SEZ6LQ9BYH1 1024 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 GPR62Q9BZJ7 368 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 LTB4R2Q9NPC1 389 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 LMCD1Q9NZU5 365 aa15.64■□□□□ 0.09
LDLR-204ENST00000545707 LEF1Q9UJU2 399 aaPredicted RBP15.64■□□□□ 0.09
LDLR-204ENST00000545707 A0A1W2PPW3 197 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 TRIM64CA6NLI5 447 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 SYCE1LA8MT33 242 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 F5H5T6 163 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 E2F3O00716 465 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 VPS4BO75351 444 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 CYBAP13498 195 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 PKMP14618 531 aaKnown RBP15.63■□□□□ 0.09
LDLR-204ENST00000545707 CD247P20963 164 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 ELK4P28324 431 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 POLR2IP36954 125 aaKnown RBP15.63■□□□□ 0.09
LDLR-204ENST00000545707 GNA12Q03113 381 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 FOXM1Q08050 763 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 DSC1Q08554 894 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 GLYATQ6IB77 296 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 AFTPHQ6ULP2 937 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 ABRAXAS1Q6UWZ7 409 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 KCTD8Q6ZWB6 473 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 SFRP1Q8N474 314 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 SPC25Q9HBM1 224 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 SUN2Q9UH99 717 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 TRMT6Q9UJA5 497 aaKnown RBP15.63■□□□□ 0.09
LDLR-204ENST00000545707 SCAMP3O14828 347 aaKnown RBP15.63■□□□□ 0.09
LDLR-204ENST00000545707 RSL1D1O76021 490 aaKnown RBP15.63■□□□□ 0.09
LDLR-204ENST00000545707 IGLV3-27P01718 113 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 CNPP09543 421 aaKnown RBP15.63■□□□□ 0.09
LDLR-204ENST00000545707 TFPTP0C1Z6 253 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 G6PDP11413 515 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 MAPKAPK2P49137 400 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 SGSHP51688 502 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 ERVK-8P63133 956 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms