RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PPP1R21Q6ZMI0 780 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 SLC9B2Q86UD5 537 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 PIM3Q86V86 326 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 ZNF547Q8IVP9 402 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 OR13C4Q8NGS5 318 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 WDR36Q8NI36 951 aaKnown RBP15.5■□□□□ 0.07
CCDC78-216ENST00000544996 ULK4Q96C45 1275 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 ZNF514Q96K75 400 aaPredicted RBP15.5■□□□□ 0.07
CCDC78-216ENST00000544996 PBKQ96KB5 322 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 FOXP3Q9BZS1 431 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 EPB41L5Q9HCM4 733 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 PRDM8Q9NQV8 689 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 KCNK4Q9NYG8 393 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 CRLS1Q9UJA2 301 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 ATXN7L1Q9ULK2 861 aaPredicted RBP15.5■□□□□ 0.07
CCDC78-216ENST00000544996 SATB2Q9UPW6 733 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 DNAJC16Q9Y2G8 782 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 SLC30A1Q9Y6M5 507 aa15.5■□□□□ 0.07
CCDC78-216ENST00000544996 CCDC187A0A096LP49 1063 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 A6NCN8 305 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 PDZK1P1A8MUH7 402 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 GPR39O43194 453 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 KIF5CO60282 957 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 EML2O95834 649 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 ETS1P14921 441 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 IDSP22304 550 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 CCKBRP32239 447 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 PDX1P52945 283 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 GPLD1P80108 840 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 SEMA5AQ13591 1074 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 LAMB3Q13751 1172 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 FOXR1Q6PIV2 292 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 B3GNT8Q7Z7M8 397 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 AMZ2Q86W34 360 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 REXO1L1PQ8IX06 675 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 RASGEF1AQ8N9B8 481 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 FGF11Q92914 225 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 DCUN1D1Q96GG9 259 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 LIN37Q96GY3 246 aaPredicted RBP15.49■□□□□ 0.07
CCDC78-216ENST00000544996 AHCYL2Q96HN2 611 aaKnown RBP15.49■□□□□ 0.07
CCDC78-216ENST00000544996 ZNF578Q96N58 590 aaPredicted RBP15.49■□□□□ 0.07
CCDC78-216ENST00000544996 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.49■□□□□ 0.07
CCDC78-216ENST00000544996 ZMYND15Q9H091 742 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 SARS2Q9NP81 518 aaKnown RBP15.49■□□□□ 0.07
CCDC78-216ENST00000544996 SLC23A2Q9UGH3 650 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 PCDHGA8Q9Y5G5 932 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 DNMT3AQ9Y6K1 912 aaPredicted RBP15.49■□□□□ 0.07
CCDC78-216ENST00000544996 ASPMQ8IZT6 3477 aa15.49■□□□□ 0.07
CCDC78-216ENST00000544996 MAP1BP46821 2468 aaKnown RBP15.49■□□□□ 0.07
CCDC78-216ENST00000544996 KNTC1P50748 2209 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 OR2AG2A6NM03 316 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 CFAP99D6REC4 459 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 POP7O75817 140 aaKnown RBP15.48■□□□□ 0.07
CCDC78-216ENST00000544996 DXOO77932 396 aaKnown RBP15.48■□□□□ 0.07
CCDC78-216ENST00000544996 SUN1O94901 812 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 APRTP07741 180 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 MC4RP32245 332 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 XIAPP98170 497 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 SKIDA1Q1XH10 827 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 TBC1D25Q3MII6 688 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 GPR33Q49SQ1 333 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 TMEM220Q6QAJ8 160 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 USP53Q70EK8 1073 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 SNX20Q7Z614 316 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 OR52K1Q8NGK4 314 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 OR10G6Q8NH81 332 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 STYXQ8WUJ0 223 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 HEXDCQ8WVB3 486 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 TMEM159Q96B96 161 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 DNAJC1Q96KC8 554 aaKnown RBP15.48■□□□□ 0.07
CCDC78-216ENST00000544996 NAP1L3Q99457 506 aaPredicted RBP15.48■□□□□ 0.07
CCDC78-216ENST00000544996 DPYSL5Q9BPU6 564 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 KCNF1Q9H3M0 494 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 RDH14Q9HBH5 336 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 THSD1Q9NS62 852 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 NLE1Q9NVX2 485 aaPredicted RBP15.48■□□□□ 0.07
CCDC78-216ENST00000544996 PIH1D1Q9NWS0 290 aaKnown RBP15.48■□□□□ 0.07
CCDC78-216ENST00000544996 TRMT1Q9NXH9 659 aaKnown RBP15.48■□□□□ 0.07
CCDC78-216ENST00000544996 AKAP7Q9P0M2 348 aaPredicted RBP15.48■□□□□ 0.07
CCDC78-216ENST00000544996 CPNE7Q9UBL6 633 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 EPG5Q9HCE0 2579 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 IGF2RP11717 2491 aa15.48■□□□□ 0.07
CCDC78-216ENST00000544996 IGHV1OR21-1A0A087WYE8 117 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 AGAP14A8MT82 685 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 PLD2O14939 933 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 RRP8O43159 456 aaKnown RBP15.47■□□□□ 0.07
CCDC78-216ENST00000544996 XRCC1P18887 633 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-216ENST00000544996 CD1CP29017 333 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 RPL22P35268 128 aaKnown RBP15.47■□□□□ 0.07
CCDC78-216ENST00000544996 HALP42357 657 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 MLLT3P42568 568 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-216ENST00000544996 CTSCP53634 463 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 ERVPABLB-1P60509 514 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 ZFP36L1Q07352 338 aaKnown RBP15.47■□□□□ 0.07
CCDC78-216ENST00000544996 SQSTM1Q13501 440 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 SEPT7Q16181 437 aaKnown RBP15.47■□□□□ 0.07
CCDC78-216ENST00000544996 FNBP1LQ5T0N5 605 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-216ENST00000544996 PHF19Q5T6S3 580 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 AGAP9Q5VTM2 703 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms