RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 CTSKP43235 329 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 LEPRP48357 1165 aaKnown RBP12.93□□□□□ -0.34
DDX11-227ENST00000544652 EIF2B5Q13144 721 aaKnown RBP12.93□□□□□ -0.34
DDX11-227ENST00000544652 CTBP1Q13363 440 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 BRD3Q15059 726 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 ZNF648Q5T619 568 aaPredicted RBP12.93□□□□□ -0.34
DDX11-227ENST00000544652 RNF187Q5TA31 235 aaPredicted RBP12.93□□□□□ -0.34
DDX11-227ENST00000544652 ZNF470Q6ECI4 717 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 ENPP7Q6UWV6 458 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 MARK2Q7KZI7 788 aaKnown RBP12.93□□□□□ -0.34
DDX11-227ENST00000544652 SDCCAG8Q86SQ7 713 aaPredicted RBP12.93□□□□□ -0.34
DDX11-227ENST00000544652 LDB1Q86U70 411 aaPredicted RBP12.93□□□□□ -0.34
DDX11-227ENST00000544652 SLC26A11Q86WA9 606 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 DENND6AQ8IWF6 608 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 RBFAQ8N0V3 343 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 MREGQ8N565 214 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 PNPLA1Q8N8W4 532 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 RASGEF1AQ8N9B8 481 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 OR56A4Q8NGH8 313 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 LPGAT1Q92604 370 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 CCDC97Q96F63 343 aaPredicted RBP12.93□□□□□ -0.34
DDX11-227ENST00000544652 MCMBPQ9BTE3 642 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 BOCQ9BWV1 1114 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 ZCCHC2Q9C0B9 1178 aaKnown RBP12.93□□□□□ -0.34
DDX11-227ENST00000544652 P2RY12Q9H244 342 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 ACSS3Q9H6R3 686 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 VPS37BQ9H9H4 285 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 FGF22Q9HCT0 170 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 ARFGAP3Q9NP61 516 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 FAM86C1Q9NVL1 165 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 SLC6A14Q9UN76 642 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 GPR34Q9UPC5 381 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 ANKRD6Q9Y2G4 727 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 DGKBQ9Y6T7 804 aa12.93□□□□□ -0.34
DDX11-227ENST00000544652 A0A087WUV0 522 aaPredicted RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 A0A1B0GVT2 93 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 PRSS38A1L453 326 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 CXorf49A8MYA2 514 aaPredicted RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 PATE3B3GLJ2 98 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 PFDN6O15212 129 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 CDK14O94921 469 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 ACSL3O95573 720 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 LMNAP02545 664 aaKnown RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 RALBP11234 206 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 ATP1B2P14415 290 aaPredicted RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 ZNF7P17097 686 aaPredicted RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 ZNF8P17098 575 aaPredicted RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 MSH3P20585 1137 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 GABRB3P28472 473 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 POLD2P49005 469 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 C21orf59P57076 290 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 NAB1Q13506 487 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 SMAD1Q15797 465 aaKnown RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 UAP1Q16222 522 aaPredicted RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 KBTBD12Q3ZCT8 623 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 MAP9Q49MG5 647 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 TRIM61Q5EBN2 209 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 ZNF789Q5FWF6 425 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 KCTD16Q68DU8 428 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 PARGQ86W56 976 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 LRRC6Q86X45 466 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 GDAP1Q8TB36 358 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 OR1E3Q8WZA6 343 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 CDKL2Q92772 493 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 PPANQ9NQ55 473 aaKnown RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 NSMCE4AQ9NXX6 385 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 ZFATQ9P243 1243 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 VPS9D1Q9Y2B5 631 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 TMEM98Q9Y2Y6 226 aa12.92□□□□□ -0.34
DDX11-227ENST00000544652 COL5A1P20908 1838 aaPredicted RBP12.92□□□□□ -0.34
DDX11-227ENST00000544652 CFAP99D6REC4 459 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 PRMT5O14744 637 aaPredicted RBP12.91□□□□□ -0.34
DDX11-227ENST00000544652 OR1I1O60431 355 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 LRP3O75074 770 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 NDUFS3O75489 264 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 AP2A2O94973 939 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 ASMTLO95671 621 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 AHSGP02765 367 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 CSF2P04141 144 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 NME1P15531 152 aaKnown RBP12.91□□□□□ -0.34
DDX11-227ENST00000544652 PMLP29590 882 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 AKT1P31749 480 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 PRLHRP49683 370 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 SRP54P61011 504 aaKnown RBP12.91□□□□□ -0.34
DDX11-227ENST00000544652 MPP1Q00013 466 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 GRIK2Q13002 908 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 GTF2H3Q13889 308 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 SLC29A2Q14542 456 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 ZNF423Q2M1K9 1284 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 ALG11Q2TAA5 492 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 KIF19Q2TAC6 998 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 BCL7AQ4VC05 210 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 PYCR3Q53H96 274 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 C11orf96Q7Z7L8 435 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 ZNF547Q8IVP9 402 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 OXR1Q8N573 874 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 OTUD6BQ8N6M0 293 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 PDXPQ96GD0 296 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 DCUN1D1Q96GG9 259 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms