RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	ECI2	O75521	394 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	RFPL2	O75678	378 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	SORBS2	O94875	1100 aa	Known RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	CDK14	O94921	469 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	PGLS	O95336	258 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	ESR1	P03372	595 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	SNRPB2	P08579	225 aa	Known RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	CD1E	P15812	388 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	RPS3	P23396	243 aa	Known RBP eCLIP	11.15	□□□□□ -0.62	9e-13	■■■■■ 37.3
LDHA-222	ENST00000543695	MRPL19	P49406	292 aa	Known RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	THOP1	P52888	689 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	PTPN5	P54829	565 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	STX1B	P61266	288 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	SLC7A9	P82251	487 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	CDH18	Q13634	790 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	PFKFB4	Q16877	469 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	MPPE1	Q53F39	396 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	AGK	Q53H12	422 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	ZRANB3	Q5FWF4	1079 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	CTSL3P	Q5NE16	218 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	MPP7	Q5T2T1	576 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	IER5L	Q5T953	404 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	ARMC12	Q5T9G4	340 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	ANKS6	Q68DC2	871 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	REP15	Q6BDI9	236 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	PSAPL1	Q6NUJ1	521 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	RETSAT	Q6NUM9	610 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	LILRA6	Q6PI73	481 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	CERS6	Q6ZMG9	384 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	RPS27L	Q71UM5	84 aa	Known RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	TMEM126B	Q8IUX1	230 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	SPNS2	Q8IVW8	549 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	KBTBD2	Q8IY47	623 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	HMGCLL1	Q8TB92	370 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	ZNF483	Q8TF39	744 aa	Predicted RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	SMG7	Q92540	1137 aa	Known RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	KCNJ9	Q92806	393 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	ACD	Q96AP0	544 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	CCDC124	Q96CT7	223 aa	Known RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	NR1H4	Q96RI1	486 aa	Predicted RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	SLC25A23	Q9BV35	468 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	P2RY12	Q9H244	342 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	CXorf56	Q9H5V9	222 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	MID1IP1	Q9NPA3	183 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	SMPD4	Q9NXE4	827 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	IL17C	Q9P0M4	197 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	PKP3	Q9Y446	797 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	PCDHB1	Q9Y5F3	818 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	CPQ	Q9Y646	472 aa		11.15	□□□□□ -0.62
LDHA-222	ENST00000543695	PIKFYVE	Q9Y2I7	2098 aa		11.15	□□□□□ -0.63
LDHA-222	ENST00000543695	NPEPPSL1	A6NEC2	478 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	BCAS2	O75934	225 aa	Predicted RBP	11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	HDC	P19113	662 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	EEF1D	P29692	281 aa	Known RBP	11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	NUBP1	P53384	320 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	PSME3	P61289	254 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	SH3BP2	P78314	561 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	CLC	Q05315	142 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	LCP2	Q13094	533 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	TDG	Q13569	410 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	CEACAM7	Q14002	265 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	LRP8	Q14114	963 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	TSN	Q15631	228 aa	Known RBP	11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	LYPLAL1	Q5VWZ2	237 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	CLEC6A	Q6EIG7	209 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	IZUMO2	Q6UXV1	221 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	LINGO4	Q6UY18	593 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	CYHR1	Q6ZMK1	362 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	RNF111	Q6ZNA4	994 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	HTR3D	Q70Z44	454 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	PIANP	Q8IYJ0	282 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	EFCAB3	Q8N7B9	438 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	GRIN3A	Q8TCU5	1115 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	TWIST2	Q8WVJ9	160 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	PIH1D2	Q8WWB5	315 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	MRPS31	Q92665	395 aa	Known RBP	11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	PDLIM5	Q96HC4	596 aa	Known RBP	11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	SLC22A12	Q96S37	553 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	NPAS2	Q99743	824 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	GPR63	Q9BZJ6	419 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	KLHL4	Q9C0H6	718 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	IRF2BPL	Q9H1B7	796 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	PFDN4	Q9NQP4	134 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	NUDT4	Q9NZJ9	180 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	SUCO	Q9UBS9	1254 aa	Known RBP	11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	IKZF3	Q9UKT9	509 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	FCF1	Q9Y324	198 aa	Known RBP	11.14	□□□□□ -0.63
LDHA-222	ENST00000543695	SLC30A1	Q9Y6M5	507 aa		11.14	□□□□□ -0.63
LDHA-222	ENST00000543695		A6NHS1	94 aa		11.13	□□□□□ -0.63
LDHA-222	ENST00000543695	CDC7	O00311	574 aa		11.13	□□□□□ -0.63
LDHA-222	ENST00000543695	CFLAR	O15519	480 aa		11.13	□□□□□ -0.63
LDHA-222	ENST00000543695	HTRA2	O43464	458 aa	Predicted RBP	11.13	□□□□□ -0.63
LDHA-222	ENST00000543695	NIPSNAP2	O75323	286 aa		11.13	□□□□□ -0.63
LDHA-222	ENST00000543695	SIX3	O95343	332 aa	Predicted RBP	11.13	□□□□□ -0.63
LDHA-222	ENST00000543695	PAPLN	O95428	1278 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms