RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 EFTUD2Q15029 972 aaKnown RBP eCLIP11.41□□□□□ -0.582e-8■■■■■ 57.6
COPS7A-217ENST00000543537 MYLK3Q32MK0 819 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 CARD16Q5EG05 197 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 SPDYAQ5MJ70 313 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 ZNF470Q6ECI4 717 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 RAPH1Q70E73 1250 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 USP45Q70EL2 814 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 RAB44Q7Z6P3 723 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-217ENST00000543537 TBC1D1Q86TI0 1168 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-217ENST00000543537 CILP2Q8IUL8 1156 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 PPP1R14CQ8TAE6 165 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 MGARPQ8TDB4 240 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 BLOC1S5Q8TDH9 187 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 HEXDCQ8WVB3 486 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 ZNF75CPQ92670 426 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-217ENST00000543537 CDKN2AIPNLQ96HQ2 116 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 C7orf26Q96N11 449 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 TRIM55Q9BYV6 548 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 STN1Q9H668 368 aaKnown RBP11.41□□□□□ -0.58
COPS7A-217ENST00000543537 EBF2Q9HAK2 575 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 IL21RQ9HBE5 538 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 SNX15Q9NRS6 342 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 TM7SF3Q9NS93 570 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 CATSPERZQ9NTU4 200 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 KCTD5Q9NXV2 234 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 LHX3Q9UBR4 397 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 SARDHQ9UL12 918 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 TMCO1Q9UM00 188 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 ARL2BPQ9Y2Y0 163 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 VWA7Q9Y334 891 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 NEUROG3Q9Y4Z2 214 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 CHD5Q8TDI0 1954 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 IGF2RP11717 2491 aa11.41□□□□□ -0.58
COPS7A-217ENST00000543537 A0A096LPK6 155 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 A0A1W2PR77 199 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 C1QTNF3-AMACRE9PGA6 284 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 CD3EAPO15446 510 aaKnown RBP11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SNX3O60493 162 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 DCTN3O75935 186 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 ATP5HO75947 161 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 CD160O95971 181 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 MT-CO1P00395 513 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 AHSGP02765 367 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 ALDOAP04075 364 aaKnown RBP11.4□□□□□ -0.58
COPS7A-217ENST00000543537 PROS1P07225 676 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 CYP2A6P11509 494 aaPredicted RBP11.4□□□□□ -0.58
COPS7A-217ENST00000543537 ZNF30P17039 623 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 TAC1P20366 129 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 PSMD8P48556 350 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 OVGP1Q12889 678 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 MPP2Q14168 576 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SETDB1Q15047 1291 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 TRIP6Q15654 476 aaKnown RBP11.4□□□□□ -0.58
COPS7A-217ENST00000543537 AGBL4Q5VU57 503 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 NEK5Q6P3R8 708 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 Q6ZVU0 165 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 IQCHQ86VS3 1027 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 TRIM69Q86WT6 500 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 KDF1Q8NAX2 398 aaPredicted RBP11.4□□□□□ -0.58
COPS7A-217ENST00000543537 TMIEQ8NEW7 156 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 OR2A12Q8NGT7 310 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 PPP4R1Q8TF05 950 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 ADAMTS14Q8WXS8 1223 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SNX19Q92543 992 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 GATA6Q92908 595 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 HDAC10Q969S8 669 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SKA1Q96BD8 255 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SCRN2Q96FV2 425 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SEC16BQ96JE7 1060 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SCNM1Q9BWG6 230 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SLC13A1Q9BZW2 595 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 THAP1Q9NVV9 213 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SIRPGQ9P1W8 387 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 KLHL42Q9P2K6 505 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 DMTF1Q9Y222 760 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 CHKBQ9Y259 395 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 MSRB2Q9Y3D2 182 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 PCDHB1Q9Y5F3 818 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SNX11Q9Y5W9 270 aa11.4□□□□□ -0.58
COPS7A-217ENST00000543537 SPAARA0A1B0GVQ0 90 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 HMX2A2RU54 273 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 TMEM8BA6NDV4 472 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 SLCO1B7G3V0H7 640 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 TPP1O14773 563 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 MUSKO15146 869 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 SNAP91O60641 907 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 EDF1O60869 148 aaKnown RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 NDUFS3O75489 264 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 ZNF821O75541 412 aaPredicted RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 KLHL2O95198 593 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 C2P06681 752 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 BPGMP07738 259 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 CHRNA4P43681 627 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 ZNF140P52738 457 aaPredicted RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 SEC24CP53992 1094 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 CACNG1Q06432 222 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 FOXC1Q12948 553 aa11.39□□□□□ -0.59
COPS7A-217ENST00000543537 PDE1CQ14123 709 aaPredicted RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 SUZ12Q15022 739 aaKnown RBP11.39□□□□□ -0.59
COPS7A-217ENST00000543537 LRRC14Q15048 493 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms