RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 PTCD2Q8WV60 388 aaKnown RBP10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 HNRNPLLQ8WVV9 542 aaKnown RBP10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 RTP4Q96DX8 246 aa10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 DCUN1D1Q96GG9 259 aa10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 OSGEPL1Q9H4B0 414 aa10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 VPS37BQ9H9H4 285 aa10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 HOMER3Q9NSC5 361 aa10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 KLC4Q9NSK0 619 aa10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 TBC1D29Q9UFV1 150 aa10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 ACSL6Q9UKU0 697 aa10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 PACSIN2Q9UNF0 486 aaPredicted RBP10.14□□□□□ -0.79
NPIPB4-217ENST00000543449 MYLKQ15746 1914 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 A6NCN8 305 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 PDZK1P1A8MUH7 402 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 F5H423 210 aaPredicted RBP10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 QSOX1O00391 747 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 PPM1DO15297 605 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 SRP72O76094 671 aaKnown RBP10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 PRAMEF1O95521 474 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 GSTM1P09488 218 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 MSNP26038 577 aaKnown RBP10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 CD1CP29017 333 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 AKT1P31749 480 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 CSTF2P33240 577 aaKnown RBP eCLIP10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 TMPRSS3P57727 454 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 GSTM4Q03013 218 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 DMPKQ09013 629 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 CHRNA6Q15825 494 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 COL28A1Q2UY09 1125 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 MEI1Q5TIA1 1274 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 AADACL2Q6P093 401 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 CYB5D1Q6P9G0 228 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 ZNF449Q6P9G9 518 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 KLHL35Q6PF15 583 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 FOXR1Q6PIV2 292 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 CRTC3Q6UUV7 619 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 ABRAXAS1Q6UWZ7 409 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 AMZ2Q86W34 360 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 SLC13A5Q86YT5 568 aaPredicted RBP10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 PLXDC1Q8IUK5 500 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 FAM71DQ8N9W8 422 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 OR4K2Q8NGD2 314 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 ANP32BQ92688 251 aaKnown RBP10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 PRR11Q96HE9 360 aaPredicted RBP10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 TTC1Q99614 292 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 TMEM121Q9BTD3 319 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 FOXP3Q9BZS1 431 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 ASB8Q9H765 288 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 C10orf88Q9H8K7 445 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 PAK5Q9P286 719 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 CPNE7Q9UBL6 633 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 CRLS1Q9UJA2 301 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 ATXN7L1Q9ULK2 861 aaPredicted RBP10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 ZNF148Q9UQR1 794 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 PLEKHM1Q9Y4G2 1056 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 PCDHB11Q9Y5F2 797 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 ST14Q9Y5Y6 855 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 SLC30A1Q9Y6M5 507 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 ACACAQ13085 2346 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 ASXL3Q9C0F0 2248 aa10.13□□□□□ -0.79
NPIPB4-217ENST00000543449 URB1O60287 2271 aaKnown RBP10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 TEX51A0A1B0GUA7 166 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 E7EVH7 732 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 H7C0S8 307 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 TOX3O15405 576 aaPredicted RBP10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 LIASO43766 372 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 AP2A1O95782 977 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 THRAP10827 490 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 LMAN1P49257 510 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 RAB15P59190 212 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 CCDC173Q0VFZ6 552 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 CDH17Q12864 832 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 NFATC2Q13469 925 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 CCNG2Q16589 344 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 SKIDA1Q1XH10 827 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 BCL7AQ4VC05 210 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 GPRC6AQ5T6X5 926 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 KCTD11Q693B1 232 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 DRICH1Q6PGQ1 229 aaPredicted RBP10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 C19orf48Q6RUI8 117 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 USP53Q70EK8 1073 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 NLRP9Q7RTR0 991 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 SNX20Q7Z614 316 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 B3GNT8Q7Z7M8 397 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 PDZD3Q86UT5 571 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 JAMLQ86YT9 394 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 SPACA3Q8IXA5 215 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 CCDC89Q8N998 374 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 LSM14AQ8ND56 463 aaKnown RBP10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 STYXQ8WUJ0 223 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 ZFPM2Q8WW38 1151 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 PATE1Q8WXA2 126 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 CXorf40BQ96DE9 158 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 TEFMQ96QE5 360 aaKnown RBP10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 TAAR9Q96RI9 348 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 COPS8Q99627 209 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 FAM118BQ9BPY3 351 aa10.12□□□□□ -0.79
NPIPB4-217ENST00000543449 GORASP1Q9BQQ3 440 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms