RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 GIPC1O14908 333 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 KLK8O60259 260 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 NDUFS3O75489 264 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 NCF1P14598 390 aaPredicted RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 RPS9P46781 194 aaKnown RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 POLR2JP52435 117 aaKnown RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 ZNF140P52738 457 aaPredicted RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 UFM1P61960 85 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 ERVK-8P63133 956 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 PDCD4Q53EL6 469 aaKnown RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 KIAA2013Q8IYS2 634 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 NKAPQ8N5F7 415 aaKnown RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 MAGEE2Q8TD90 523 aaPredicted RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 FBXO32Q969P5 355 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 TRIB3Q96RU7 358 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 GPR21Q99679 349 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 OSBPL6Q9BZF3 934 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 HIPK3Q9H422 1215 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 SUN2Q9UH99 717 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 PCTPQ9UKL6 214 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 FAF1Q9UNN5 650 aaPredicted RBP16.44■□□□□ 0.22
KDM2B-216ENST00000543025 NOD1Q9Y239 953 aa16.44■□□□□ 0.22
KDM2B-216ENST00000543025 CROCCQ5TZA2 2017 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 SLC12A8A0AV02 714 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 NPEPPSL1A6NEC2 478 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 BTN3A1O00481 513 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 C1RP00736 705 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 CASP2P42575 452 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 CYBRD1Q53TN4 286 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 C10orf120Q5SQS8 335 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 PROSER1Q86XN7 944 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 OFCC1Q8IZS5 231 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 BBS5Q8N3I7 341 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 ZNF420Q8TAQ5 688 aaPredicted RBP16.43■□□□□ 0.22
KDM2B-216ENST00000543025 PLEKHG4BQ96PX9 1271 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 HGH1Q9BTY7 390 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 SEZ6LQ9BYH1 1024 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 IL37Q9NZH6 218 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 ZIM2Q9NZV7 527 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 ZNF225Q9UK10 706 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 CDC14AQ9UNH5 594 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 FAM92AA1XBS5 289 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 LDLRP01130 860 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 NPPAP01160 153 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 IGLV3-27P01718 113 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 VARSP26640 1264 aaKnown RBP16.43■□□□□ 0.22
KDM2B-216ENST00000543025 HTR1EP28566 365 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 STT3AP46977 705 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 CTBSQ01459 385 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 RBBP7Q16576 425 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 NANOGP8Q6NSW7 305 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 GLT6D1Q7Z4J2 308 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 OR56A4Q8NGH8 313 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 GPR152Q8TDT2 470 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 OSCP1Q8WVF1 389 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 RPL10LQ96L21 214 aaKnown RBP16.43■□□□□ 0.22
KDM2B-216ENST00000543025 TMEM74Q96NL1 305 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 MGME1Q9BQP7 344 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 NANOGQ9H9S0 305 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 CXorf21Q9HAI6 301 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 RIC8BQ9NVN3 520 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 SLAMF8Q9P0V8 285 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 PCDHB5Q9Y5E4 795 aa16.43■□□□□ 0.22
KDM2B-216ENST00000543025 B4GALT3O60512 393 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 ENO2P09104 434 aaPredicted RBP16.42■□□□□ 0.22
KDM2B-216ENST00000543025 COL6A1P12109 1028 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 AGTR2P50052 363 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 TMED1Q13445 227 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 TIGD2Q4W5G0 525 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 UGT3A1Q6NUS8 523 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 ZNF598Q86UK7 904 aaKnown RBP16.42■□□□□ 0.22
KDM2B-216ENST00000543025 OR4K2Q8NGD2 314 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 OR2T11Q8NH01 316 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 MYEOVQ96EZ4 313 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 SLC30A3Q99726 388 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 C1orf50Q9BV19 199 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 RPF2Q9H7B2 306 aaKnown RBP16.42■□□□□ 0.22
KDM2B-216ENST00000543025 PLGRKTQ9HBL7 147 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 TLR8Q9NR97 1041 aaKnown RBP16.42■□□□□ 0.22
KDM2B-216ENST00000543025 IRAK4Q9NWZ3 460 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 CDH7Q9ULB5 785 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 KIAA0100Q14667 2235 aaKnown RBP16.42■□□□□ 0.22
KDM2B-216ENST00000543025 FAM234BA2RU67 622 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 INPPL1O15357 1258 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 SOX11P35716 441 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 ATN1P54259 1190 aaPredicted RBP16.42■□□□□ 0.22
KDM2B-216ENST00000543025 EMX2Q04743 252 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 PMS2P3Q13401 168 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 TRIM71Q2Q1W2 868 aaKnown RBP16.42■□□□□ 0.22
KDM2B-216ENST00000543025 KLHL35Q6PF15 583 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 ZNF280BQ86YH2 543 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 FAM126BQ8IXS8 530 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 LRRC43Q8N309 656 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 RMDN1Q96DB5 314 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 VPS50Q96JG6 964 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 BDH2Q9BUT1 245 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 LRRC3Q9BY71 257 aa16.42■□□□□ 0.22
KDM2B-216ENST00000543025 INTS7Q9NVH2 962 aaKnown RBP16.42■□□□□ 0.22
KDM2B-216ENST00000543025 TMEM45AQ9NWC5 275 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms