RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 IL17CQ9P0M4 197 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ACTR3BQ9P1U1 418 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 BTRCQ9Y297 605 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 YIPF1Q9Y548 306 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 PCDHGC4Q9Y5F7 938 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 COMMD3-BMI1R4GMX3 469 aa6.49□□□□□ -1.37
PTPRO-208ENST00000542557 ANAPC1Q9H1A4 1944 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 A0A1B0GTL3 188 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 DYTNA2CJ06 578 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GFRA2O00451 464 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 E2F3O00716 465 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 KIF3CO14782 793 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 SNX2O60749 519 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 EEDO75530 441 aaKnown RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 SEC24AO95486 1093 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 LINC00032P0C843 101 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 RPS3P23396 243 aaKnown RBP eCLIP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 SLC6A2P23975 617 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ALDH7A1P49419 539 aaKnown RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 CDKN1CP49918 316 aaPredicted RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 HK3P52790 923 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 AP1S1P61966 158 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ERVK-8P63133 956 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 MYBPC1Q00872 1141 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 INPP5AQ14642 412 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 RPS6KA2Q15349 733 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 VPS26BQ4G0F5 336 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ZRANB3Q5FWF4 1079 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 C6orf52Q5T4I8 152 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 FAM219BQ5XKK7 198 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 HMBOX1Q6NT76 420 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GPRIN3Q6ZVF9 776 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 PTRH1Q86Y79 214 aaKnown RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GPSM1Q86YR5 675 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 EFHBQ8N7U6 833 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 DCAF4L2Q8NA75 395 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 HJURPQ8NCD3 748 aaPredicted RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF461Q8TAF7 563 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GRIN3AQ8TCU5 1115 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 LRTOMTQ8WZ04 291 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 LRRC58Q96CX6 371 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 IGSF21Q96ID5 467 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 SLC45A3Q96JT2 553 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 CNBD2Q96M20 576 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 MFRPQ9BY79 579 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 MAGEE1Q9HCI5 957 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 C8orf4Q9NR00 106 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GKN1Q9NS71 199 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 DNMT3BQ9UBC3 853 aaKnown RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GALPQ9UBC7 116 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GIMAP2Q9UG22 337 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF225Q9UK10 706 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 PKP3Q9Y446 797 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF711Q9Y462 761 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 PCDHA9Q9Y5H5 950 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ST14Q9Y5Y6 855 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 MICAL3Q7RTP6 2002 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 TET1Q8NFU7 2136 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF839A8K0R7 811 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 E5RI56 91 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 PRMT5O14744 637 aaPredicted RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GIPC1O14908 333 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 HNRNPRO43390 633 aaKnown RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 OR1I1O60431 355 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 CLPTM1O96005 669 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 NPPAP01160 153 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GPIP06744 558 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 PSMC3P17980 439 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 RPL17P18621 184 aaKnown RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GSTT1P30711 240 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 HMGCLP35914 325 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ZFP36L2P47974 494 aaKnown RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 AGTR2P50052 363 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 CLCN7P51798 805 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 KCNK10P57789 538 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 VEPH1Q14D04 833 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 PCBP2Q15366 365 aaKnown RBP eCLIP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 TGFBIQ15582 683 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ADRM1Q16186 407 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 FXNQ16595 210 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 TMEM259Q4ZIN3 620 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 MTX3Q5HYI7 312 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 INTS11Q5TA45 600 aaKnown RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 NAIF1Q69YI7 327 aaPredicted RBP6.48□□□□□ -1.37
PTPRO-208ENST00000542557 CYP2R1Q6VVX0 501 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 PRR23BQ6ZRT6 265 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 ADAMTSL2Q86TH1 951 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 CARM1Q86X55 608 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 CPNE9Q8IYJ1 553 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 GALNT4Q8N4A0 578 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 DDI1Q8WTU0 396 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 NAT14Q8WUY8 206 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 EEF1AKMT1Q8WVE0 214 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 SMIM14Q96QK8 99 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 CLSTN3Q9BQT9 956 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 HGH1Q9BTY7 390 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 TRIM4Q9C037 500 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 RNF38Q9H0F5 515 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 COQ10BQ9H8M1 238 aa6.48□□□□□ -1.37
PTPRO-208ENST00000542557 CMTM6Q9NX76 183 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms