RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 TIMP2P16035 220 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 ZNF7P17097 686 aaPredicted RBP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 PGM1P36871 562 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 RECQLP46063 649 aaPredicted RBP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 MXRA7P84157 204 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 UGT3A2Q3SY77 523 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 ACSBG2Q5FVE4 666 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 PPP2R2DQ66LE6 453 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 TANGO2Q6ICL3 276 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 PDE12Q6L8Q7 609 aaKnown RBP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 CERS6Q6ZMG9 384 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 DET1Q7L5Y6 550 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 THTPAQ9BU02 230 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 FBRSL1Q9HCM7 1045 aaKnown RBP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 PCDH12Q9NPG4 1184 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 ADAMTS6Q9UKP5 1117 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 SORCS3Q9UPU3 1222 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 PLK4O00444 970 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 SLC9A3R1O14745 358 aaPredicted RBP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 HNRNPCL1O60812 293 aaKnown RBP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 FSHRP23945 695 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 ETV3P41162 512 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 ATP6V0D1P61421 351 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 RIPK1Q13546 671 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 DMC1Q14565 340 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 ZNF648Q5T619 568 aaPredicted RBP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 Q6ZVL8 140 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 TMPRSS6Q8IU80 811 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 ETFBKMTQ8IXQ9 262 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 RBFAQ8N0V3 343 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 STK40Q8N2I9 435 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 BPIFB1Q8TDL5 484 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 DLG3Q92796 817 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 SMARCD2Q92925 531 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 MCUR1Q96AQ8 359 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 MAELQ96JY0 434 aaKnown RBP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 ZNF385DQ9H6B1 395 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 ZNF225Q9UK10 706 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 DNAJC15Q9Y5T4 150 aa17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 COPG1Q9Y678 874 aaKnown RBP17.06■□□□□ 0.32
TMEM50B-210ENST00000542230 PLXNB3Q9ULL4 1909 aa17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 DOCK8Q8NF50 2099 aa17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 COX4I1P13073 169 aa17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 PIK3R1P27986 724 aa17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 SPINT3P49223 89 aa17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 ACAD11Q709F0 780 aa17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 CBARPQ8N350 705 aaPredicted RBP17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 EML4Q9HC35 981 aaKnown RBP17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 ELOVL2Q9NXB9 296 aa17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 DPP7Q9UHL4 492 aa17.05■□□□□ 0.32
TMEM50B-210ENST00000542230 FCARP24071 287 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 COPAP53621 1224 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 CREB5Q02930 508 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 GRIN2CQ14957 1233 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 KPNB1Q14974 876 aaKnown RBP17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 TGFBIQ15582 683 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 SBSNQ6UWP8 590 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 GPSM1Q86YR5 675 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 SLC2A11Q9BYW1 496 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 PLA2G2FQ9BZM2 168 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 HPS4Q9NQG7 708 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 EIF2B4Q9UI10 523 aaKnown RBP17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 TIMM22Q9Y584 194 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 ZNF106Q9H2Y7 1883 aaKnown RBP17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 ATG2BQ96BY7 2078 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 CXorf51AA0A1B0GTR3 108 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 AGAP14A8MT82 685 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 SLCO1B7G3V0H7 640 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 HOXC11O43248 304 aaPredicted RBP17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 CD9P21926 228 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 CLCQ05315 142 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 GRM2Q14416 872 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 TBCCQ15814 346 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 KHDC1Q4VXA5 237 aaKnown RBP17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 METTL21CQ5VZV1 264 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 HMGCLL1Q8TB92 370 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 SLC45A3Q96JT2 553 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 CDK15Q96Q40 435 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 FAM83CQ9BQN1 747 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 TUBB1Q9H4B7 451 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 SFXN1Q9H9B4 322 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 MEAF6Q9HAF1 191 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 CD274Q9NZQ7 290 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 IL36AQ9UHA7 158 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 PACSIN3Q9UKS6 424 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 BTRCQ9Y297 605 aa17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 NUP210Q8TEM1 1887 aaPredicted RBP17.04■□□□□ 0.32
TMEM50B-210ENST00000542230 H0Y3Z8 333 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 PEX11AO75192 247 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 GUCA1CO95843 209 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 ADH1CP00326 375 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 POU2F2P09086 479 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 RPS3P23396 243 aaKnown RBP eCLIP17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 E2F5Q15329 346 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 GPRC6AQ5T6X5 926 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 SNX32Q86XE0 403 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 FAM161BQ96MY7 647 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 SAMD11Q96NU1 681 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 GNPTGQ9UJJ9 305 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms