RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 SRPK1Q96SB4 655 aaKnown RBP8.64□□□□□ -1.03
CLSTN3-212ENST00000541770 GORASP1Q9BQQ3 440 aa8.64□□□□□ -1.03
CLSTN3-212ENST00000541770 MLPHQ9BV36 600 aaPredicted RBP8.64□□□□□ -1.03
CLSTN3-212ENST00000541770 GOLGA6AQ9NYA3 693 aa8.64□□□□□ -1.03
CLSTN3-212ENST00000541770 APPL1Q9UKG1 709 aa8.64□□□□□ -1.03
CLSTN3-212ENST00000541770 PLAAQ9Y263 795 aa8.64□□□□□ -1.03
CLSTN3-212ENST00000541770 NPIPB15A6NHN6 443 aaPredicted RBP8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 ERI2A8K979 691 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 RHPN2P1A8MT19 583 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 CCDC188H7C350 402 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 PMPCBO75439 489 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 HEXIM1O94992 359 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 METTL18O95568 372 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 CPNE6O95741 557 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 FGF1P05230 155 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 MPSTP25325 297 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 RPL22P35268 128 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 ADRA1AP35348 466 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 UGT1A3P35503 534 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 TNNT3P45378 269 aaPredicted RBP8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 MAZP56270 477 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 OR1D5P58170 312 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 RALGDSQ12967 914 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 TUBB2AQ13885 445 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 SLC1A5Q15758 541 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 PCSK7Q16549 785 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 QPCTQ16769 361 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 WSCD2Q2TBF2 565 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 KCTD16Q68DU8 428 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 CCDC70Q6NSX1 233 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 RANBP10Q6VN20 620 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 LIPIQ6XZB0 460 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 GSTA5Q7RTV2 222 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 ATCAYQ86WG3 371 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 SLITRK4Q8IW52 837 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 NRSN1Q8IZ57 195 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 CACNA2D3Q8IZS8 1091 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 GLIS1Q8NBF1 620 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 CCL4L1Q8NHW4 92 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 OR1E3Q8WZA6 343 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 SLCO2A1Q92959 643 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 PMEPA1Q969W9 287 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 LRRC45Q96CN5 670 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 CAPZA3Q96KX2 299 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 CCDC74BQ96LY2 380 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 TAAR9Q96RI9 348 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 NUDT22Q9BRQ3 303 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 TUBB2BQ9BVA1 445 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 FSD1LQ9BXM9 530 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 TMEM168Q9H0V1 697 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 ARNT2Q9HBZ2 717 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 MAGEE1Q9HCI5 957 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 CYP4F12Q9HCS2 524 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 KCTD5Q9NXV2 234 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 UBP1Q9NZI7 540 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 B4GALT6Q9UBX8 382 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 PCYOX1Q9UHG3 505 aa8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 UBR5O95071 2799 aaPredicted RBP8.63□□□□□ -1.03
CLSTN3-212ENST00000541770 PTPN13Q12923 2485 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 BOD1L1Q8NFC6 3051 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 COL12A1Q99715 3063 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 TMEM202A6NGA9 273 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 ZNF891A8MT65 544 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 F5H423 210 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 CACNB4O00305 520 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 PDE2AO00408 941 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 NKX2-8O15522 239 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 B4GAT1O43505 415 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 NUDT21O43809 227 aaKnown RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 DUX1O43812 170 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 RAD1O60671 282 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 SUN1O94901 812 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 AP2A1O95782 977 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 PRKCGP05129 697 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 ELFN1P0C7U0 828 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 ZSCAN5DPP0CG00 497 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 FGF3P11487 239 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 ETS1P14921 441 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 PNLIPP16233 465 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 CTPS1P17812 591 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 LHCGRP22888 699 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 LIG3P49916 1009 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 B4GALNT1Q00973 533 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 SEMA5AQ13591 1074 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 GALNT3Q14435 633 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 HLTFQ14527 1009 aaKnown RBP eCLIP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 CNGA3Q16281 694 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 SIRPB2Q5JXA9 342 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 C16orf46Q6P387 395 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 OGFOD3Q6PK18 319 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 ZNF572Q7Z3I7 529 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 KDELC2Q7Z4H8 507 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 FAM129CQ86XR2 697 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 PLA2G15Q8NCC3 412 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 IPMKQ8NFU5 416 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 OR56A4Q8NGH8 313 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 GPBAR1Q8TDU6 330 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 ART4Q93070 314 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 COQ10AQ96MF6 247 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms