RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 UTS2RQ9UKP6 389 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 COG5Q9UP83 839 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 EXO1Q9UQ84 846 aaKnown RBP4.25□□□□□ -1.73
SNHG1-217ENST00000541578 LAMP3Q9UQV4 416 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 POMT1Q9Y6A1 747 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 CEPT1Q9Y6K0 416 aa4.25□□□□□ -1.73
SNHG1-217ENST00000541578 ZFP37Q9Y6Q3 630 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-217ENST00000541578 FLT1P17948 1338 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 NALCNQ8IZF0 1738 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 KIR2DS5A0A0G2JLQ3 304 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 BICDL2A1A5D9 508 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 URADA6NGE7 173 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 FOXO6A8MYZ6 492 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 H0YIN7 160 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 KIR2DS3K7RE56 304 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 ZC3H11AO75152 810 aaKnown RBP eCLIP4.24□□□□□ -1.731e-6■■□□□ 11.7
SNHG1-217ENST00000541578 NDUFB8O95169 186 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 SYF2O95926 243 aaKnown RBP4.24□□□□□ -1.73
SNHG1-217ENST00000541578 UNGP13051 313 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-217ENST00000541578 MMP9P14780 707 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 IFNAR1P17181 557 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 SRD5A1P18405 259 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 RYKP34925 604 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 RAB28P51157 221 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 TAS2R40P59535 323 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 GRSF1Q12849 480 aaKnown RBP eCLIP4.24□□□□□ -1.73
SNHG1-217ENST00000541578 GRAPQ13588 217 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 SNAPC1Q16533 368 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 CRY2Q49AN0 593 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 ZNF805Q5CZA5 627 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 ENTPD8Q5MY95 495 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 ARMC4Q5T2S8 1044 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 KRT79Q5XKE5 535 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 IQCHQ86VS3 1027 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 CAMK1DQ8IU85 385 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 ZNF713Q8N859 430 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-217ENST00000541578 SCCPDHQ8NBX0 429 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 GDAP1Q8TB36 358 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 TEKT4Q8WW24 435 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 LPGAT1Q92604 370 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 FAM162AQ96A26 154 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 HDAC11Q96DB2 347 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 CCDC114Q96M63 670 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 CEP295NLQ96MC4 621 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 CFAP57Q96MR6 1250 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 CCDC43Q96MW1 224 aaKnown RBP4.24□□□□□ -1.73
SNHG1-217ENST00000541578 PIMREGQ9BSJ6 248 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 RTN4RQ9BZR6 473 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 AAMDCQ9H7C9 122 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 DNAJC18Q9H819 358 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 GPR108Q9NPR9 543 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 C5AR2Q9P296 337 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 DDX25Q9UHL0 483 aaKnown RBP4.24□□□□□ -1.73
SNHG1-217ENST00000541578 ZNF112Q9UJU3 913 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 PADI1Q9ULC6 663 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 PCDHA12Q9UN75 941 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 ZNF148Q9UQR1 794 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 A3GALT2U3KPV4 340 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 SLIT2O94813 1529 aa4.24□□□□□ -1.73
SNHG1-217ENST00000541578 KIF1BO60333 1816 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 HFM1A2PYH4 1435 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 DISP2A7MBM2 1401 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 TRAV34A0A0B4J273 112 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 C1orf226A1L170 272 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 IFNL4K9M1U5 179 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 ADAMDEC1O15204 470 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 TADA2AO75478 443 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 DAB1O75553 588 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 RGS11O94810 467 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 TOMM40O96008 361 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 ALPLP05186 524 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 MMP2P08253 660 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 ENO3P13929 434 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 TRIM21P19474 475 aaKnown RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 TNFRSF1BP20333 461 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 PTAFRP25105 342 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 HMGB2P26583 209 aaKnown RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 TKTP29401 623 aaKnown RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 SHMT1P34896 483 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 CCR3P51677 355 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 MRPS34P82930 218 aaKnown RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 GAD2Q05329 585 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 RALGDSQ12967 914 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 NEDD9Q14511 834 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 IL11RAQ14626 422 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 PGM5Q15124 567 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 ESCO2Q56NI9 601 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 DAB2IPQ5VWQ8 1189 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 SIGIRRQ6IA17 410 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 CAVIN1Q6NZI2 390 aaKnown RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 FBXO46Q6PJ61 603 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 CFAP77Q6ZQR2 320 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 C9orf47Q6ZRZ4 202 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 DENND5BQ6ZUT9 1274 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 CAMKMTQ7Z624 323 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 NOXA1Q86UR1 476 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 MFN1Q8IWA4 741 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 MCEMP1Q8IX19 187 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 FAM217AQ8IXS0 508 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 DDIASQ8IXT1 998 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms