RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 BBS5Q8N3I7 341 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 Q8NA96 180 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 CFAP61Q8NHU2 1237 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 MIPOL1Q8TD10 442 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 GFM2Q969S9 779 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 ARHGEF26Q96DR7 871 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 C11orf24Q96F05 449 aaPredicted RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 MYRFLQ96LU7 910 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 KLHL32Q96NJ5 620 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 NAP1L3Q99457 506 aaPredicted RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 SSX3Q99909 188 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 SH3GL1Q99961 368 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 BCL7BQ9BQE9 202 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 WDR83Q9BRX9 315 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 TTYH3Q9C0H2 523 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 KCNF1Q9H3M0 494 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 AKIRIN1Q9H9L7 192 aaPredicted RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.52□□□□□ -1.532e-7■■■■□ 20.6
DDB1-219ENST00000541513 FAM118AQ9NWS6 357 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 SPG21Q9NZD8 308 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 KLHL14Q9P2G3 628 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 Q9UFV3 132 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 EBF1Q9UH73 591 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 DBR1Q9UK59 544 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 CNOT11Q9UKZ1 510 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 RIMKLBQ9ULI2 386 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 CNOT6Q9ULM6 557 aaKnown RBP5.52□□□□□ -1.53
DDB1-219ENST00000541513 SLC8A2Q9UPR5 921 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 DLGAP4Q9Y2H0 992 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 SLC27A6Q9Y2P4 619 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 PCDHB2Q9Y5E7 798 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 ADAMTSL1Q8N6G6 1762 aa5.52□□□□□ -1.53
DDB1-219ENST00000541513 RAD50Q92878 1312 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 FOCADQ5VW36 1801 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CYP3A7-CYP3A51PA0A087WV96 503 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 C2orf78A6NCI8 922 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 NPIPB13A6NJU9 1138 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 NPIPB5A8MRT5 1133 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CXorf49A8MYA2 514 aaPredicted RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 NPIPB4C9JG80 1138 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 M0QZQ0 153 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 SSX5O60225 188 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 MED24O75448 989 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 FRAT2O75474 233 aaPredicted RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 SMC2O95347 1197 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 FGFR1OPO95684 399 aaKnown RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 S100A9P06702 114 aaKnown RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 MMP9P14780 707 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 HNRNPA2B1P22626 353 aaKnown RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 CYP3A7P24462 503 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 MGAT1P26572 445 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CDC25CP30307 473 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 TIA1P31483 386 aaKnown RBP eCLIP5.51□□□□□ -1.53
DDB1-219ENST00000541513 UQCRC1P31930 480 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CSF2RBP32927 897 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 RDXP35241 583 aaKnown RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 GJC1P36383 396 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 ARHGAP25P42331 645 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 KIR2DL3P43628 341 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 KCNJ1P48048 391 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CLK3P49761 638 aaKnown RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 GATMP50440 423 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 RPS6KA3P51812 740 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 GTF2A1P52655 376 aaPredicted RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 NPEPPSP55786 919 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 LILRA4P59901 499 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 RAPSNQ13702 412 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CCNIQ14094 377 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 GALNT3Q14435 633 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 EFTUD2Q15029 972 aaKnown RBP eCLIP5.51□□□□□ -1.531e-6■■■■□ 22.1
DDB1-219ENST00000541513 SLC18A3Q16572 532 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CDO1Q16878 200 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 ZXDCQ2QGD7 858 aaPredicted RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 TXNDC8Q6A555 127 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 BICRALQ6AI39 1079 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 ZNF529Q6P280 563 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 C11orf57Q6ZUT1 292 aaPredicted RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 TADA2BQ86TJ2 420 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 KRTAP19-1Q8IUB9 90 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 IGDCC3Q8IVU1 814 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CFAP206Q8IYR0 622 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 HACE1Q8IYU2 909 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 KRT222Q8N1A0 295 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 BEND2Q8NDZ0 799 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 OR8K3Q8NH51 312 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 EDARADDQ8WWZ3 215 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 C19orf60Q96EN9 201 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 NRBF2Q96F24 287 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 TSPAN17Q96FV3 270 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 COQ10AQ96MF6 247 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 EIF3CQ99613 913 aaKnown RBP5.51□□□□□ -1.53
DDB1-219ENST00000541513 ZSCAN5AQ9BUG6 496 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 TPPP3Q9BW30 176 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CAPS2Q9BXY5 557 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 B3GNT4Q9C0J1 378 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 RAB33BQ9H082 229 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 P2RY12Q9H244 342 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 MMP27Q9H306 513 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 CXorf36Q9H7Y0 433 aa5.51□□□□□ -1.53
DDB1-219ENST00000541513 RMND5AQ9H871 391 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms