RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 NIPAL4Q0D2K0 466 aa26.37■■□□□ 1.81
CHFR-218ENST00000540963 CACHD1Q5VU97 1274 aa26.37■■□□□ 1.81
CHFR-218ENST00000540963 NCBP2-AS2Q69YL0 99 aa26.37■■□□□ 1.81
CHFR-218ENST00000540963 TMEM135Q86UB9 458 aa26.37■■□□□ 1.81
CHFR-218ENST00000540963 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.37■■□□□ 1.81
CHFR-218ENST00000540963 CPT1CQ8TCG5 803 aa26.37■■□□□ 1.81
CHFR-218ENST00000540963 PDE7BQ9NP56 450 aa26.37■■□□□ 1.81
CHFR-218ENST00000540963 SLC40A1Q9NP59 571 aa26.37■■□□□ 1.81
CHFR-218ENST00000540963 PCDHGA9Q9Y5G4 932 aaKnown RBP26.37■■□□□ 1.81
CHFR-218ENST00000540963 PDGFAP04085 211 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 HLA-DQB2P05538 268 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 ZNF7P17097 686 aaPredicted RBP26.36■■□□□ 1.81
CHFR-218ENST00000540963 UQCRFS1P47985 274 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 MMRN1Q13201 1228 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 INSCQ1MX18 579 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 AGAP9Q5VTM2 703 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 ADGRG6Q86SQ4 1221 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 LRRTM4Q86VH4 590 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 TRAM1L1Q8N609 369 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 SSC4DQ8WTU2 575 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 CT55Q8WUE5 264 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 SPATA16Q9BXB7 569 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 ZFYVE1Q9HBF4 777 aa26.36■■□□□ 1.81
CHFR-218ENST00000540963 RTN4Q9NQC3 1192 aaKnown RBP26.36■■□□□ 1.81
CHFR-218ENST00000540963 TNRC6AQ8NDV7 1962 aaKnown RBP26.35■■□□□ 1.81
CHFR-218ENST00000540963 VEGFDO43915 354 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 MBD3O95983 291 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 MX2P20592 715 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 GNLYP22749 145 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 ARSEP51690 589 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 UGT8Q16880 541 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 ANO6Q4KMQ2 910 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 TDRD12Q587J7 1177 aaKnown RBP26.35■■□□□ 1.81
CHFR-218ENST00000540963 E4F1Q66K89 784 aaPredicted RBP26.35■■□□□ 1.81
CHFR-218ENST00000540963 UBXN4Q92575 508 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 GLYATL1Q969I3 302 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 ELMO2Q96JJ3 720 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 ACTL8Q9H568 366 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 MLXIPLQ9NP71 852 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 SLC23A2Q9UGH3 650 aa26.35■■□□□ 1.81
CHFR-218ENST00000540963 SHANK1Q9Y566 2161 aa26.34■■□□□ 1.81
CHFR-218ENST00000540963 PDZK1P1A8MUH7 402 aa26.34■■□□□ 1.81
CHFR-218ENST00000540963 GOLGA6L22H0YM25 854 aa26.34■■□□□ 1.81
CHFR-218ENST00000540963 HADHQ16836 314 aaKnown RBP26.34■■□□□ 1.81
CHFR-218ENST00000540963 PAPD7Q5XG87 772 aaKnown RBP26.34■■□□□ 1.81
CHFR-218ENST00000540963 RSC1A1Q92681 617 aa26.34■■□□□ 1.81
CHFR-218ENST00000540963 EID2BQ96D98 161 aa26.34■■□□□ 1.81
CHFR-218ENST00000540963 HDAC11Q96DB2 347 aa26.34■■□□□ 1.81
CHFR-218ENST00000540963 SLC41A2Q96JW4 573 aa26.34■■□□□ 1.81
CHFR-218ENST00000540963 ZNF670Q9BS34 389 aa26.34■■□□□ 1.81
CHFR-218ENST00000540963 RARRES3Q9UL19 164 aa26.34■■□□□ 1.81
CHFR-218ENST00000540963 KIF1CO43896 1103 aaKnown RBP26.33■■□□□ 1.81
CHFR-218ENST00000540963 MMP2P08253 660 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 CD48P09326 243 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 BRAFP15056 766 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 IDSP22304 550 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 PGDP52209 483 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 DPYSL3Q14195 570 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 CRTC3Q6UUV7 619 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 SYVN1Q86TM6 617 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 NUP85Q9BW27 656 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 MAGEE1Q9HCI5 957 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 ANAPC7Q9UJX3 599 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 MAP4K5Q9Y4K4 846 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 PCDHGB7Q9Y5F8 929 aa26.33■■□□□ 1.81
CHFR-218ENST00000540963 PTPN4P29074 926 aa26.32■■□□□ 1.8
CHFR-218ENST00000540963 GPR18Q14330 331 aa26.32■■□□□ 1.8
CHFR-218ENST00000540963 PDK2Q15119 407 aa26.32■■□□□ 1.8
CHFR-218ENST00000540963 GPR26Q8NDV2 337 aa26.32■■□□□ 1.8
CHFR-218ENST00000540963 CXorf40BQ96DE9 158 aa26.32■■□□□ 1.8
CHFR-218ENST00000540963 BPIFA3Q9BQP9 254 aa26.32■■□□□ 1.8
CHFR-218ENST00000540963 SLC25A23Q9BV35 468 aa26.32■■□□□ 1.8
CHFR-218ENST00000540963 TRIM55Q9BYV6 548 aa26.32■■□□□ 1.8
CHFR-218ENST00000540963 XPO4Q9C0E2 1151 aaKnown RBP26.32■■□□□ 1.8
CHFR-218ENST00000540963 ARFGAP3Q9NP61 516 aa26.32■■□□□ 1.8
CHFR-218ENST00000540963 KCNJ13O60928 360 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 DNAJB5O75953 348 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 SORBS2O94875 1100 aaKnown RBP26.31■■□□□ 1.8
CHFR-218ENST00000540963 VCLP18206 1134 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 CD86P42081 329 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 ACY1Q03154 408 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 TUBB3Q13509 450 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 ZNF648Q5T619 568 aaPredicted RBP26.31■■□□□ 1.8
CHFR-218ENST00000540963 IRGCQ6NXR0 463 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 KLHL35Q6PF15 583 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 FAM92BQ6ZTR7 304 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 TMC3Q7Z5M5 1100 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 KMT5CQ86Y97 462 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 ZNF547Q8IVP9 402 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 SIDT2Q8NBJ9 832 aaKnown RBP26.31■■□□□ 1.8
CHFR-218ENST00000540963 NAP1L5Q96NT1 182 aaPredicted RBP26.31■■□□□ 1.8
CHFR-218ENST00000540963 DNAJC16Q9Y2G8 782 aa26.31■■□□□ 1.8
CHFR-218ENST00000540963 MED13Q9UHV7 2174 aa26.3■■□□□ 1.8
CHFR-218ENST00000540963 MYO1FO00160 1098 aa26.3■■□□□ 1.8
CHFR-218ENST00000540963 TIAF1O95411 115 aa26.3■■□□□ 1.8
CHFR-218ENST00000540963 DDAH2O95865 285 aa26.3■■□□□ 1.8
CHFR-218ENST00000540963 VARSP26640 1264 aaKnown RBP26.3■■□□□ 1.8
CHFR-218ENST00000540963 RPS15P62841 145 aaKnown RBP26.3■■□□□ 1.8
CHFR-218ENST00000540963 SEPT7Q16181 437 aaKnown RBP26.3■■□□□ 1.8
CHFR-218ENST00000540963 PWWP2BQ6NUJ5 590 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms