RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 NOBOXO60393 691 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 CSO75390 466 aaKnown RBP8.33□□□□□ -1.08
CHD4-208ENST00000540960 BANF1O75531 89 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 CNTN5O94779 1100 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 TGDSO95455 350 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 PEX11BO96011 259 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 ITGA2BP08514 1039 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 PYGBP11216 843 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 DRD4P21917 467 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 TYK2P29597 1187 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 SLC26A3P40879 764 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 CD86P42081 329 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 CD97P48960 835 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 PLK1P53350 603 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 LIMK2P53671 638 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 RAD51Q06609 339 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 SETDB1Q15047 1291 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 TEAD4Q15561 434 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 SLC1A5Q15758 541 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 TSNAXIP1Q2TAA8 658 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 AARS2Q5JTZ9 985 aaKnown RBP8.33□□□□□ -1.08
CHD4-208ENST00000540960 RNF187Q5TA31 235 aaPredicted RBP8.33□□□□□ -1.08
CHD4-208ENST00000540960 KDELC1Q6UW63 502 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 Q6ZNB5 142 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 CCDC121Q6ZUS5 278 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 KANSL1Q7Z3B3 1105 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 TRMT11Q7Z4G4 463 aaKnown RBP8.33□□□□□ -1.08
CHD4-208ENST00000540960 STRA8Q7Z7C7 330 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 MFN1Q8IWA4 741 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 MPP5Q8N3R9 675 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 OTUD6BQ8N6M0 293 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 MGARPQ8TDB4 240 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 MZB1Q8WU39 189 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 STYXQ8WUJ0 223 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 ISL2Q96A47 359 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 MRRFQ96E11 262 aaKnown RBP8.33□□□□□ -1.08
CHD4-208ENST00000540960 NUDCD1Q96RS6 583 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 TCF12Q99081 682 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 RBBP8Q99708 897 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 ORAI3Q9BRQ5 295 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 WDR83Q9BRX9 315 aaKnown RBP8.33□□□□□ -1.08
CHD4-208ENST00000540960 ACTR5Q9H9F9 607 aaPredicted RBP8.33□□□□□ -1.08
CHD4-208ENST00000540960 PDFQ9HBH1 243 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 MRGBPQ9NV56 204 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 VPS28Q9UK41 221 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 ATXN7L1Q9ULK2 861 aaPredicted RBP8.33□□□□□ -1.08
CHD4-208ENST00000540960 ARL2BPQ9Y2Y0 163 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 PLLPQ9Y342 182 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 CPQQ9Y646 472 aa8.33□□□□□ -1.08
CHD4-208ENST00000540960 RP1L1Q8IWN7 2480 aaPredicted RBP8.32□□□□□ -1.08
CHD4-208ENST00000540960 A0A087X1B8 175 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 ZCWPW2A0A1B0GU75 182 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 ERICH4A6NGS2 130 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 CDRT15L2A8MXV6 281 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 F8W8V4 182 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 J3KR12 359 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 TBL1XO60907 577 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 TULP3O75386 442 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 DCTN3O75935 186 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 ATP5HO75947 161 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 KLKB1P03952 638 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 WNT1P04628 370 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 ADH5P11766 374 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 WT1P19544 449 aaPredicted RBP8.32□□□□□ -1.08
CHD4-208ENST00000540960 ACP1P24666 158 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 RPA3P35244 121 aaPredicted RBP8.32□□□□□ -1.08
CHD4-208ENST00000540960 NNMTP40261 264 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 GRIA1P42261 906 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 CD151P48509 253 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 NEK3P51956 506 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 HK2P52789 917 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 NAA20P61599 178 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 PRAMEP78395 509 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 POU4F1Q01851 419 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 SLC10A7Q0GE19 358 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 FUT11Q495W5 492 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 SPDYAQ5MJ70 313 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 LY6G5CQ5SRR4 150 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 CERCAMQ5T4B2 595 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 TSTD2Q5T7W7 516 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 TEDDM1Q5T9Z0 273 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 FHL5Q5TD97 284 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 MROH9Q5TGP6 573 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 RNF219Q5W0B1 726 aaPredicted RBP8.32□□□□□ -1.08
CHD4-208ENST00000540960 ZDHHC20Q5W0Z9 365 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 TTC19Q6DKK2 380 aaPredicted RBP8.32□□□□□ -1.08
CHD4-208ENST00000540960 NEPROQ6NW34 567 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 KLC3Q6P597 504 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 LVRNQ6Q4G3 990 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 MAMDC2Q7Z304 686 aaPredicted RBP8.32□□□□□ -1.08
CHD4-208ENST00000540960 SPATA21Q7Z572 469 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 PIGWQ7Z7B1 504 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 PRPF39Q86UA1 669 aaKnown RBP8.32□□□□□ -1.08
CHD4-208ENST00000540960 CACUL1Q86Y37 369 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 ETFBKMTQ8IXQ9 262 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 C4orf33Q8N1A6 199 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 CARNMT1Q8N4J0 409 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 PPP1R14CQ8TAE6 165 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 FIBINQ8TAL6 211 aa8.32□□□□□ -1.08
CHD4-208ENST00000540960 KCNV2Q8TDN2 545 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms