RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CDCP2Q5VXM1 449 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 PAPD7Q5XG87 772 aaKnown RBP9.1□□□□□ -0.95
SNHG1-215ENST00000540904 DET1Q7L5Y6 550 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 CCNJLQ8IV13 435 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 ARL14Q8N4G2 192 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 DCBLD1Q8N8Z6 715 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 RASGEF1AQ8N9B8 481 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 NAT14Q8WUY8 206 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 GATA6Q92908 595 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 DCUN1D1Q96GG9 259 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 CDKN2AIPNLQ96HQ2 116 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 C19orf43Q9BQ61 176 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 PRDM8Q9NQV8 689 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 SLC23A2Q9UGH3 650 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 SAR1BQ9Y6B6 198 aa9.1□□□□□ -0.95
SNHG1-215ENST00000540904 LRP4O75096 1905 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 TCRBV7S3A2A0A539 114 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 TRABD2BA6NFA1 517 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 OR51F1A6NGY5 319 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 H7C0S8 307 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 CSO75390 466 aaKnown RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 POP7O75817 140 aaKnown RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 RPLP0P05388 317 aaKnown RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 PRSS56P0CW18 603 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 RALBP11234 206 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 PNLIPP16233 465 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 VCLP18206 1134 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 ADRA1DP25100 572 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 RPL10P27635 214 aaKnown RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 ALDH4A1P30038 563 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 PBLDP30039 288 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 FNTAP49354 379 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 CDKN1CP49918 316 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 ARSDP51689 593 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 CTSCP53634 463 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 CRADDP78560 199 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 CDK16Q00536 496 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 CAMK2BQ13554 666 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 LAMB3Q13751 1172 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 SPIDRQ14159 915 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 SEPT7Q16181 437 aaKnown RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 FNBP1LQ5T0N5 605 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 IYDQ6PHW0 289 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 TMEM220Q6QAJ8 160 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 RBM44Q6ZP01 1051 aaKnown RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 TAS2R42Q7RTR8 314 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 SNX20Q7Z614 316 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 AMZ2Q86W34 360 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 C17orf82Q86X59 251 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 NXPE1Q8N323 547 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 SFRP1Q8N474 314 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 SLC37A2Q8TED4 501 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 GRK7Q8WTQ7 553 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 HDAC10Q969S8 669 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 ULK4Q96C45 1275 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 SGF29Q96ES7 293 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 CCDC97Q96F63 343 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 ZNF778Q96MU6 729 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 DEPDC7Q96QD5 511 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 GFM1Q96RP9 751 aaKnown RBP9.09□□□□□ -0.95
SNHG1-215ENST00000540904 COPS8Q99627 209 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 TIMM29Q9BSF4 260 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 LRRN3Q9H3W5 708 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 SLC2A6Q9UGQ3 507 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 NEU2Q9Y3R4 380 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 TCAF1Q9Y4C2 921 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 PCDHB1Q9Y5F3 818 aa9.09□□□□□ -0.95
SNHG1-215ENST00000540904 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 A0A1W2PQM1 296 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 CCDC162PA2VCL2 907 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 A6NCN8 305 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 AGAP14A8MT82 685 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 PDZK1P1A8MUH7 402 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 CFAP99D6REC4 459 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 AP3B1O00203 1094 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 NTN3O00634 580 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 FANCGO15287 622 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 PPM1DO15297 605 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 TCEA3O75764 348 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 F3P13726 295 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 SLC2A4P14672 509 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 TPSB2P20231 275 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 IDSP22304 550 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 ACRV1P26436 265 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 CLCNKAP51800 687 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 DRG2P55039 364 aaKnown RBP9.08□□□□□ -0.96
SNHG1-215ENST00000540904 OR1D5P58170 312 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 PRAMEP78395 509 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 B4GALNT1Q00973 533 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 HHEXQ03014 270 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 CACNG1Q06432 222 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 PPP1R7Q15435 360 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 TPSAB1Q15661 275 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 ISXQ2M1V0 245 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 AMZ1Q400G9 498 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 GPR33Q49SQ1 333 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 PCID2Q5JVF3 399 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 TSTD2Q5T7W7 516 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 ANKRD22Q5VYY1 191 aa9.08□□□□□ -0.96
SNHG1-215ENST00000540904 NLRP9Q7RTR0 991 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms